Lachancea thermotolerans: KLTH0G04840g
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Entry
KLTH0G04840g CDS
T01117
Name
(RefSeq) KLTH0G04840p
KO
K14315
nucleoporin NDC1
Organism
lth
Lachancea thermotolerans
Pathway
lth03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
lth00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
KLTH0G04840g
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lth03019
]
KLTH0G04840g
Messenger RNA biogenesis [BR:
lth03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
KLTH0G04840g
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ndc1_Nup
Motif
Other DBs
NCBI-GeneID:
8293514
NCBI-ProteinID:
XP_002555248
UniProt:
C5DM00
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Position
G:complement(385459..387246)
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AA seq
595 aa
AA seq
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MESSVIPSPLSSRYSYHAIFSDVCKTRFSHLVARLLFSMAVCIGALASALAQRGASKWER
TLSAPGKGILVYVGMLTVVLARKNYLHVRLPGYSSALSQAYWQLCSGQALVQLAVHILSS
ICIASALRDTVTGALQPQRVFGYRLAVWLLVPGLYTAQHVAFDLGRLAFRYGAQHQHPQQ
FIITRIHNVFAKCGVLAIAVALVLPVGSLYLGPRTSSLGVAGTFQCVILAFMIFVIWDLV
NLAFNAYLSIGCLHKGKPISSLSSTPMETLISGLSSKKPFTKLTAFQELSYRATSPNIQL
RLPIYHTRHRNVYIWPSILKECLNTIESTNSNVSAFMKSVEQQQESLRKPTANRPESLDE
RLNENGLFGNDYVITSSSQSRLPGSPPTSETLTHRITLQNNNIFARGNGDTVGSSPFQFS
DVANNPILTRQTTITDIVGDCLRQLKDTFFGFFFPVQDEDSSPQLSLFELWRVSKKMQAE
KLVPLPVCYAECVIALMGLLIKSLEEDPKGGVVSSVGEVLKILERSVGSLGGFAEWKDSL
VSRETATPDVVTILYDLSINAFLEIVLGYNELLNNVYLDEDVVKLSKWVLEICNE
NT seq
1788 nt
NT seq
+upstream
nt +downstream
nt
atggaatcctctgtcattccgagtccattgagctcgcgttacagctaccatgccatattt
agtgatgtgtgtaaaaccagatttagtcatctggtcgcacggctcttgttcagtatggct
gtttgcatcggagcgttggcgagcgcattggcacaacgcggcgcttcaaaatgggaacgt
accctctctgcacccggcaaaggtatactagtatatgtgggaatgttgacagtggtatta
gcgcgcaaaaactatcttcatgtgcggcttccagggtactcgagcgcgttatcacaagcg
tactggcaactatgttcgggacaagcattagtacagctagcagttcacattttaagcagt
atttgcattgcaagtgcgctcagggacaccgtaactggagctctacagccccaacgtgta
tttggatatcgcttggccgtatggttgctcgtgcctggtttgtacaccgcacaacatgtg
gcttttgaccttggcagactcgctttcagatatggcgcacaacatcaacacccgcaacaa
ttcattataacaagaattcacaatgtgtttgcgaagtgcggagtgctagcaatagcagtc
gcacttgtactaccggttggctcgctataccttggcccacgcacaagctctttgggtgtt
gcaggtacattccagtgcgtgattttggcatttatgatctttgtcatttgggatctagta
aaccttgctttcaatgcgtacttgtcaatcgggtgtttacacaaaggcaaacccatatcg
tcactctcttccactccaatggagacgcttatttctggcctttcatcaaaaaagccattc
acaaagctaactgctttccaggaactctcatatagggccacgtctcctaatatccaactt
cgcttacctatttaccacacgcgccacaggaatgtctacatttggcctagcattttgaaa
gagtgcttgaacaccattgaaagtacgaatagtaacgtatctgcctttatgaaaagtgtt
gaacaacagcaagaatctctgcggaaaccaaccgcgaatagaccagagtccttagatgaa
cgtcttaacgaaaatgggctctttggaaacgactacgtgatcacctcaagttctcagtca
agactgccaggttcccctccaacctccgaaacactaacccatagaatcactttacaaaac
aacaatatatttgcaagggggaatggcgacactgtaggatcaagcccctttcagttctct
gatgttgcaaacaaccccatactcacacgccagaccactattacggatattgtcggtgac
tgtctaagacagctaaaagacacgttctttggtttctttttcccagttcaggacgaggat
tcatctccgcagctcagtctgtttgagctttggcgtgtgtccaagaaaatgcaagcagaa
aagcttgttccgctgccggtgtgttacgctgagtgcgttattgccctaatgggcctctta
atcaagtcactagaggaagacccaaagggtggcgtggtttcatcagtcggcgaggttttg
aagattttagaaagatcggtaggttcgttgggcggtttcgctgaatggaaagactcactt
gtttccagagaaacagcgactccagatgttgttactattctttacgatctttcgattaac
gcattccttgaaattgtgctcggttacaacgaactactaaataatgtttaccttgatgaa
gatgttgtcaagctgagcaaatgggttctggaaatatgtaacgagtag
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