KEGG   Lachancea thermotolerans: KLTH0G04994g
Entry
KLTH0G04994g      CDS       T01117                                 
Name
(RefSeq) TFIIH/NER complex subunit TFB3
  KO
K10842  CDK-activating kinase assembly factor MAT1
Organism
lth  Lachancea thermotolerans
Pathway
lth03022  Basal transcription factors
lth03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:lth00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    KLTH0G04994g
  09124 Replication and repair
   03420 Nucleotide excision repair
    KLTH0G04994g
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:lth03021]
    KLTH0G04994g
   03400 DNA repair and recombination proteins [BR:lth03400]
    KLTH0G04994g
Transcription machinery [BR:lth03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     KLTH0G04994g
DNA repair and recombination proteins [BR:lth03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TFIIH complex
     KLTH0G04994g
SSDB
Motif
Pfam: MAT1 zf-C3HC4_5 zf-C3HC4_2 zf-C3HC4 zf-RING_2 FliS zf-RING_5 zf-RING_16 zf-RING_UBOX TRAF3_RING DIP2116-like_N zf-C3HC4_3 CATASP
Other DBs
NCBI-GeneID: 8293521
NCBI-ProteinID: XP_002555255
UniProt: C5DM07
LinkDB
Position
G:406086..407054
AA seq 322 aa
MIVDDDEKKDMCPICKTDRYLSPDMKFLVNPECYHKICESCVDRIFSLGPAQCPYEGCDK
ILRKNKFKTQVFDDVNVEKEVDIRKRVFNVFNKTLDDFEGDLKAFNKYLEEVEDIVYNLD
NGIDVANTEEKLRTYEDLNKQLIMANMKRSRQDLDNFEQRQKFEKEMKLKKRQLERQIEE
EELANREWARKEIVNQLSTADDAEDVIAHVKKTVKLKKSSARRKLEELNKVLKNNPYMTV
SNGLMKKKESVPFTPFNGDRDLNKRYTLSESQYNDPFIKSLQTKKEYIASGFRADYVYDR
MLTEAFMGLGCIIKEELRTSVK
NT seq 969 nt   +upstreamnt  +downstreamnt
atgatagtggacgatgatgagaagaaggatatgtgtcctatctgtaagacagataggtat
ctgtccccagacatgaaattcttggtgaaccccgagtgctaccacaagatatgtgaatcg
tgcgttgatagaatcttcagcctgggtcctgcacaatgcccatacgaggggtgcgataag
attttgagaaagaacaagttcaaaacgcaagtcttcgatgacgtgaacgtcgagaaagaa
gtagacatcaggaagagggtgttcaatgtattcaataaaaccctagacgatttcgagggc
gacctgaaggctttcaataagtacctggaagaggtcgaagatatcgtctacaatctagat
aacgggattgatgtggcgaatacagaggagaagctacgaacatatgaagacctcaacaag
cagctcattatggccaacatgaagcgcagcagacaggatttggacaactttgagcaacga
cagaagtttgagaaagaaatgaagctcaaaaagagacaattggagcgccaaattgaggaa
gaagaacttgctaacagagaatgggctcgcaaagagatcgtaaaccagctttccaccgca
gacgacgcagaagatgtaatagcgcatgttaaaaagactgtgaagttaaagaagtcttct
gcgagaagaaagctcgaagagctgaataaagtgctaaaaaacaatccatatatgacagtt
tcgaatggtctcatgaaaaagaaagagtccgtgccctttactcctttcaacggagacaga
gacctcaacaaacgctacacactctccgagtctcagtataacgatcccttcatcaagagc
ctgcaaactaagaaagagtacattgcatcaggtttccgtgcagattatgtttatgaccgg
atgctgaccgaggctttcatgggattaggttgcatcattaaagaggagctacggaccagc
gtcaaatag

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