Lachancea thermotolerans: KLTH0G05610g
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Entry
KLTH0G05610g CDS
T01117
Name
(RefSeq) U4/U6-U5 snRNP complex subunit PRP3
KO
K12843
U4/U6 small nuclear ribonucleoprotein PRP3
Organism
lth
Lachancea thermotolerans
Pathway
lth03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lth00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
KLTH0G05610g
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lth03041
]
KLTH0G05610g
Spliceosome [BR:
lth03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
KLTH0G05610g
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRP3
Prp3_C
DUF7267
Flo11
NPAT_C
DUF2851
DUF7716
Motif
Other DBs
NCBI-GeneID:
8293548
NCBI-ProteinID:
XP_002555281
UniProt:
C5DM33
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Position
G:complement(446541..447809)
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AA seq
422 aa
AA seq
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MRARKEKGNSSSRDGNSARFGAGLDIDIHPALLSENLNLIKHRDNPYLSRERFDTVASKV
SKRYSRGLKFRTPGVLAKELDEKRAWLAKERELQKEQDNLRKAKVRAGELPDESIGEQNY
LITDVPQIEWWDAIYVQSPEDWTIKTKYSKSYGTMDEDSDDEQDSESESPSVRYVQHPVP
VQAAEHAPSKPKIYLVKREQKKIRRNRRKLLQEEHEQKIKLGLEPKPAPKVKLSNMMSVY
QNNENITDPTSWEQTVKAQAEERHQKHVETNIRRHYEAKEQKKEKAQEAPPAQAELHCRV
FRFSSLRNPKIRFKLAKNSRQLGLRGVCLRVGDGAGIIVVIGSEKNCRFYSKLVLQRIDW
TQSYVDKDSQQFVDCSGDEAELLWEGVVKDTRFRGWFMKECRDESELQAVLSQFDADWLL
RV
NT seq
1269 nt
NT seq
+upstream
nt +downstream
nt
atgagagcgaggaaagaaaagggcaattcgagttcgcgagatggcaactcggctaggttt
ggggctggtttggatatcgacatccatcctgctttgctttccgagaatcttaaccttata
aagcatcgcgacaacccgtacttgtcgcgcgagaggttcgacacggtcgcctcgaaggtt
tctaaaaggtactcaagagggcttaagttccgcacgcccggtgttctggcgaaagagcta
gatgaaaaacgggcatggctcgcaaaagagcgcgagctccaaaaagagcaggacaatctt
cgaaaggctaaggttcgtgccggtgagcttccagatgagtccattggtgaacagaactac
ttaatcacggatgtgcctcagatagagtggtgggatgcaatttacgtgcagagccctgaa
gactggacaattaaaacaaaatactccaaaagttatggtacaatggatgaggattctgat
gatgaacaagactccgaatcagaatcacctagtgtccgatatgtgcaacatcctgtgcct
gtacaagctgcagagcatgcaccatcaaaacccaaaatataccttgtgaaaagagagcaa
aagaagatacgccgcaataggaggaagctactccaagaagagcatgagcagaagatcaaa
ctgggactggagcctaagcctgccccaaaggtcaagctcagcaatatgatgagtgtttac
caaaataatgaaaatattactgatcctacgagttgggagcagaccgtaaaagcgcaagca
gaggaaagacatcaaaagcatgtagagacaaacatcagacgtcattacgaggccaaagag
cagaaaaaagagaaggcacaggaagcaccacccgctcaggctgagttgcattgccgggta
tttcgcttcagcagtctgcgtaatccaaaaattaggttcaagcttgccaagaatagccga
cagctaggtctaagaggtgtttgcctcagggtcggagacggagccggcattattgttgtc
atcggaagtgaaaagaactgccgtttttactcaaaattggtcctacagcggatagactgg
acgcagtcttacgtggacaaagactcgcaacagtttgtggattgcagtggggatgaagcg
gagctattgtgggagggagttgtcaaggacacccgttttcgggggtggttcatgaaggaa
tgccgagacgagtcagaattgcaagctgtgctcagccagtttgacgccgactggctgtta
cgggtttga
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