Lachancea thermotolerans: KLTH0G07326g
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Entry
KLTH0G07326g CDS
T01117
Name
(RefSeq) FG-nucleoporin NSP1
KO
K14306
nuclear pore complex protein Nup62
Organism
lth
Lachancea thermotolerans
Pathway
lth03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
lth00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
KLTH0G07326g
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lth03019
]
KLTH0G07326g
Messenger RNA biogenesis [BR:
lth03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
KLTH0G07326g
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nsp1_C
Muted
PRP9_N
Motif
Other DBs
NCBI-GeneID:
8293626
NCBI-ProteinID:
XP_002555356
UniProt:
C5DMA8
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Position
G:complement(join(591049..593741,593816))
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AA seq
897 aa
AA seq
DB search
MSFQFNLNSNSSANFGGNSPFGSASAPTKDQNSQSSGFSGFSSNPSTNAQQTSGNTPGFG
ASQGQQGSLFGKPLGGTTPAFGSSSAPKPFGSLGGSSPFGAQPATTTPANENDKKESQST
GFNLGGNTASANNAKPTAPFSFGTTPAATGKDDKPLFGGASSASPFQFGAASNQGTSAPA
QSSTNKPTLNFGSSSNSKPAFSFGAASASDAKSGLGDTTKTLESAAQTSSAGSKSPFTFG
ASTAKSTETNASSGPGTSTVEKKDDAKPAFSFGGTSGTNTAAPKSSPSLNFGGSAANKKE
ESKPAFSFGTAASEKKEEPMPAFSFGGTSSTTKEDSKPAFSFGGAPSDKKEDSKPAFSFG
EAANNKKEDPKPAFSFGATASDKKENPKPALSFGGATADKTEASKPELSLGGTTTNKNEV
SKPAFSLGTASSDIKEDPKPAFSFGTANNDKKEEAKPAFKLGGLGEKKDEPKSTFAFGAP
GEKSADKPVSSKPETNDGNASSKPSLGFLAGSENKSGGKPAFSFGKSAESTNASDKRVGF
GNSSEQGNKLGAGTSEASKGSFNFGGLGAQQQKSDANKGGSLSFGAKDPKQDKENKSFGF
SNSSGTGSDSKPSATGFSFGQNKESATSSKPSGFSFGAKDKDKEEKDAPKTTLSFRKDTD
GSSTSKPSNFGFGSKKEAEKKDGTQREAAPSSTGTEAQKPIEIQPVSLDNKTLDDLVTKW
TSQLGGSVDHFATYADKVKEWDQVLMLGGEQIGQLYSDALVAEQTQNRVDQSLQYIERQQ
SELETFLDNYEKKAEGLLSGVLSNSNGSTGNINDQKRQQAYQTAEILDDNLNSLSMNLSA
LISEINQVSDTFNKATNMSVTNEDENTQLIKLLNSHLDALKSLDNSSDLLEQKLTKL
NT seq
2694 nt
NT seq
+upstream
nt +downstream
nt
atgagtttccaatttaacctcaacagcaactctagcgctaacttcggaggaaactctcca
tttggcagtgcgagcgcgccgacaaaagatcaaaactcccaaagctcaggcttctcaggc
ttttcctctaatcctagtactaatgcgcaacaaacgagcggaaacacccctgggtttggt
gcatctcaagggcaacaaggcagtctttttgggaaaccattgggtggtactactcccgca
ttcggttcctcgagcgcgccaaaaccttttgggtctcttggcggctcttccccgtttggg
gctcaacctgccactaccaccccggcaaatgagaatgataaaaaagagtcccagtccaca
ggattcaacctcggaggcaacacagccagtgctaataacgctaagccaactgctcctttc
tctttcggaactacacctgctgcgactggtaaagacgataaacctttatttggtggtgct
agtagcgcatcgcccttccaatttggagcggcatccaatcaaggaacctcagcaccagct
cagagttccaccaataaaccaacgctaaattttggaagctcaagtaattcaaagcccgcg
tttagtttcggcgcagctagcgctagcgacgccaagagcggattaggggacacaactaaa
actttagaaagcgcagcacaaacatcatctgctggttcaaaatctcctttcacgtttggc
gctagtacagcaaaaagtacagaaacaaatgcttcttcgggaccgggtacgtccacggtt
gagaaaaaggatgacgctaagccggcatttagcttcggcggtacttcaggtaccaatact
gcggctcctaagtcctctccctccctaaactttggcggctctgctgcaaacaagaaagaa
gaatcaaaaccagcattcagttttggcactgccgcgtctgaaaagaaagaagaaccaatg
ccggcttttagcttcggtgggacttcgagcactactaaagaggattccaagcctgcattt
tctttcggaggagcgcccagcgacaaaaaagaggattcgaaaccagcttttagctttggc
gaggctgcaaacaacaaaaaagaagatccaaaacctgctttcagcttcggagctaccgcc
tccgacaagaaagaaaacccaaaaccggcacttagcttcgggggggccacagcagacaag
accgaagcgtcgaaaccagaattaagtttgggggggaccacaaccaacaagaatgaagtt
tccaaaccagccttcagcttggggactgcttcttccgatataaaggaggacccaaaaccg
gctttcagtttcggtacagctaataatgacaaaaaagaagaagccaaaccagcgttcaag
ctcggcggtctcggggaaaaaaaggacgaaccaaaatcgacattcgcatttggcgcccct
ggcgagaagagcgccgataaaccagtatcgtccaagcctgagactaacgacggaaatgcg
agctcaaagccatcgctcggttttcttgccggatcggagaataagagcggtggaaagcct
gccttcagttttggaaaatcggctgaaagcacgaatgcttctgacaaaagggttggtttt
ggaaatagctcagaacaaggaaacaagttgggcgcagggacttctgaagctagcaagggc
tcctttaactttggcggtttaggcgcgcagcagcaaaaaagtgatgcaaacaagggagga
tctttgtccttcggagccaaagatcctaagcaagacaaagaaaacaaatcttttggcttc
tccaatagttcgggcacaggttctgactccaaacctagtgcgactggcttctcgtttggt
caaaacaaagagtctgcaacatcatcaaagcctagcggtttttcatttggtgcaaaagac
aaagacaaagaagaaaaggacgcacccaagacgacactaagctttaggaaagacactgac
ggatcctccacgtcaaaaccatccaattttggctttgggtctaaaaaggaggccgaaaaa
aaggatggcactcaacgtgaggctgcgccctcaagcacgggcacagaagctcaaaagcca
atcgagattcaacccgtgtctttggataacaaaactcttgacgatcttgtcacaaaatgg
acatctcagctaggaggatctgtggaccactttgccacatatgcggataaagttaaagag
tgggatcaagtgttgatgcttggcggcgaacaaattggtcaactttactcggacgctctt
gtggcggaacagacacagaacagggttgaccagtcgctacagtacatcgaaagacaacaa
agtgaattggaaacgtttttggataactatgaaaagaaagcagagggcctgctatcaggt
gtactgtcgaactctaacggatcgactggcaacattaatgaccagaaaaggcaacaagct
taccaaacagcagaaatactggacgacaatttaaactcattgtccatgaacctttcagca
ctgatttcagagattaaccaggtgagcgatactttcaataaggctacaaacatgagcgtt
accaatgaagacgaaaacacacaactcattaaattattgaactctcatcttgacgcattg
aaatcccttgacaatagttctgacttgttagaacaaaaacttacaaagctttaa
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