Lachancea thermotolerans: KLTH0G14300g
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Entry
KLTH0G14300g CDS
T01117
Name
(RefSeq) TFIIH/NER complex ATP-dependent 5'-3' DNA helicase subunit RAD3
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
lth
Lachancea thermotolerans
Pathway
lth03022
Basal transcription factors
lth03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
lth00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
KLTH0G14300g
09124 Replication and repair
03420 Nucleotide excision repair
KLTH0G14300g
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lth03021
]
KLTH0G14300g
03036 Chromosome and associated proteins [BR:
lth03036
]
KLTH0G14300g
03400 DNA repair and recombination proteins [BR:
lth03400
]
KLTH0G14300g
Enzymes [BR:
lth01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
KLTH0G14300g
Transcription machinery [BR:
lth03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
KLTH0G14300g
Chromosome and associated proteins [BR:
lth03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
KLTH0G14300g
DNA repair and recombination proteins [BR:
lth03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
KLTH0G14300g
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD_2
HBB
Helicase_C_2
ResIII
DEAD
AAA_11
AAA_25
Motif
Other DBs
NCBI-GeneID:
8293938
NCBI-ProteinID:
XP_002555653
UniProt:
C5DN55
LinkDB
All DBs
Position
G:complement(1243568..1245916)
Genome browser
AA seq
782 aa
AA seq
DB search
MKFYIDDLPVIFPYPKIYPEQYQYMCDIKKTLDAGGNSILEMPSGTGKTVSLLSLAVAYQ
THYAEHRKIIYCSRTMSEIEKALVELESLMDYRSKELGHKEHFRGLGLTSRKNLCLHPRV
RKERKGTVVDEKCRRMTNGQAARKAEQDPTANIELCDFHENLNTMDPENYVPVGVYSFEK
LIKYCEERTMCPYFTVRRMIAMCDIMIYSYHYLLDPKISERVSKEVSRDAIVIFDEAHNI
DNVCIESLSLDLTNDVLKRATKGANNLNEKIQEVRQVDSQRLQDEYEKLVNGLRAPDMLG
AEEPPVESPVLSQDLLSEAIPGNIRRAEHFVSFLKRFIEYLKTRMKVLHVISETPNSFLQ
HLKQLTFIERKPLRFCSERLSLLVRTLEVSEIEEFTALKDIATFATLISTYEEGFVLIIE
PYEIENAAVPNPIMRFTCLDASIAIKPVFDKFSSVIITSGTISPLDMYPKMLNFETVLQE
SYAMTLAKKSFLPMIVTKGSDQVAISSRFEIRNDPSIVRNYGSMLVEFAKITPDGMVVFF
PSYLYMESIISMWQTMGILDEVWKYKLILVETPDAQETSLALETYRKACSNGRGAILLSV
ARGKVSEGIDFDHHFGRTVLMIGIPFQYTESRILKARLEFLREHYQIRENDFLSFDAMRH
AAQCLGRVLRGKDDYGVMVLADRRFARKKGQLPKWIAQGLSDADLNLSTDMAIANTKQFL
RTMAQPTDPKDQEGVSLWNFDQLIQFQNEQKKKKGQGFVLDTQPVEEQETSKDQDGDIQM
LQ
NT seq
2349 nt
NT seq
+upstream
nt +downstream
nt
atgaaattctacattgatgatttgcctgtaatttttccgtaccctaaaatataccccgag
cagtaccaatatatgtgcgacatcaagaaaactcttgacgctgggggcaatagcatctta
gaaatgccttcggggacaggcaaaactgtatccctgctgtccctagcagttgcgtatcag
acacactatgcagagcaccgcaagatcatatactgttctcgtactatgtccgaaattgaa
aaagcactggtggagttagaatcacttatggattacaggtcaaaggaactgggccacaaa
gagcattttagagggttggggttgaccagtagaaaaaatctatgcctgcatccaagagtt
cgcaaggaaagaaaaggtactgtagtggatgagaagtgcaggcgcatgacaaatggccaa
gcagctcgcaaagctgagcaagacccaactgctaatatcgaactatgtgattttcatgag
aaccttaatactatggatcctgagaactatgttccagtgggcgtttattcttttgaaaag
ttaataaagtactgcgaagagagaacaatgtgtccgtatttcacggttcgtcgtatgatt
gctatgtgcgatataatgatttattcctaccattatttgctagacccaaagatttcagag
agagtgtctaaagaggtttccagggatgcaattgtgattttcgatgaggctcacaacatt
gataatgtttgtatcgagtcgctatcacttgacttaactaatgatgttttaaagcgtgcg
actaagggcgcaaacaacctaaacgaaaagatacaggaggttcgccaagtcgattcgcaa
agactccaggatgaatatgagaaattagtcaatggccttcgcgctcctgacatgctaggc
gcagaagaaccgccggttgagtcgccggttctctcacaggacttgctttcggaggccatt
ccaggaaatatacggagagctgagcattttgtttctttcttgaaaaggtttattgaatac
ttgaaaaccaggatgaaagtattacatgttatatccgagacacctaactcatttcttcag
catttaaagcaacttaccttcattgaaaggaaaccgttaaggttttgctccgaaaggctt
tcattgcttgtaaggacgttggaagtatcagagatcgaagaatttaccgcacttaaggat
atagcaacttttgccacattaatttcgacgtacgaggagggctttgtgttgattattgaa
ccttatgaaatagaaaatgccgctgttcccaatccaataatgaggttcacttgtcttgat
gcctcgatagcaataaagcctgtgtttgacaagttttcctctgtgatcataacttccgga
actatttcgccgttggatatgtaccccaagatgctgaattttgagactgttcttcaagag
tcttatgcaatgactttagcaaagaaatcttttcttccaatgattgtgacaaagggctct
gatcaagttgcgatctcgtcgaggttcgagattcgtaacgatccaagtattgttaggaac
tatggttctatgctagttgaatttgctaagattacgccagacggaatggtggtttttttc
ccctcatatttgtacatggagagtattatatctatgtggcaaacaatgggcattttagat
gaagtctggaagtataagcttatcttagttgaaacgccagatgcacaagaaacctctttg
gctttggaaacctatcgtaaagcctgctcaaacggccgtggagcaattttattatcagtt
gctcgaggaaaggtatcagagggaattgactttgaccatcattttggcagaaccgtgctt
atgattggtattccatttcagtacactgaatcgcgtatattgaaagctcggctcgagttc
ttaagggaacattaccaaataagggaaaatgactttttgtcatttgatgccatgagacac
gcagcgcaatgcttagggagagttctgagggggaaagacgattatggagtcatggtgtta
gcagataggcggttcgcgaggaagaaaggccagcttccgaagtggatcgcacaaggctta
tcagatgctgatctcaacctttcaacagatatggcaattgccaatacaaaacagtttttg
aggacaatggcgcagcccacagaccctaaagaccaagagggcgtttccttgtggaacttc
gatcaactgattcaatttcaaaatgaacagaaaaagaaaaagggacagggatttgtgctg
gacacgcaacctgtcgaggagcaggaaacgtcaaaggatcaagatggtgatattcagatg
ctacaataa
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