Lachancea thermotolerans: KLTH0G14476g
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Entry
KLTH0G14476g CDS
T01117
Name
(RefSeq) mismatch repair ATPase MSH6
KO
K08737
DNA mismatch repair protein MSH6
Organism
lth
Lachancea thermotolerans
Pathway
lth03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
lth00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
KLTH0G14476g
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lth03400
]
KLTH0G14476g
DNA repair and recombination proteins [BR:
lth03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
KLTH0G14476g
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_IV
MutS_II
AAA_29
Motif
Other DBs
NCBI-GeneID:
8293946
NCBI-ProteinID:
XP_002555661
UniProt:
C5DN63
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Position
G:complement(1265899..1269729)
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AA seq
1276 aa
AA seq
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MVAPSTPKSSKRSFKGSPQSSGRKNLKQASVLSFFSKHKTPSSTPLKNKKVSLFVENDDM
TENESGFVTALEDTNNHSVIEPVDSSAPLENLENSNVGNNSAIAQSGVSLLEQDHRNKAQ
SVQDDKKGYSDILSRDNASPRADPSRLENSTTRQDSGPLAEDLSETEGRRKAKRNVTYTE
DSEDEDDGNIVKTGKKRRKQLSSDEEEEYIPEGQNNSGEDDDEADLLVEIGAVDAKKELK
GDESPFMDDDDDDDDILSLSAKKPKARAGPVTSGSPVAVRSPTHRKRSPPARAPSQTGKG
KHSGFNKENEERYQWLVHERDAQGRSKEDPDYDSRTLFIPSSAWSKFTPFEKQYWEIKSR
MWDCIVFFKKGKFFELYEKDALLGNQLFDLKIAGGGRANMQLAGIPEMSFDYWAMQFIQH
GYKVAKVDQRESMLAKEMREGNKGIVKRELQHVLTSGTLTDSGMLQSDQATFCLAIKEEA
GTYHDTENGTVEPSKTESKIFGVAFIDTATGEIELLEFEDDSECSKLDTLMSQVKPKEII
MEKNNLCNLAHKIVKFNAQPQAIFNYLKPVEEFYDFNKTFDELTSTETKYFADMEHWPAV
LTHYFEKGKKVGFSAFGGLLSYLKWLKLDEAMITMGNIKEYNPIRSQNSLVLDGVTLQNL
EIFCNSFDNSDRGTLFKLLNRAITPMGKRMLKKWVVHPLLQKKDIEMRLDSVDLLLTKIE
IREVLEDKLSLLPDLERFLARVHSGALKIKDFNRVIEGFESITGLIAKLQNFELTGSLQV
FLNQIPEALSEKVEGWVGAFDRKKAVNDGVIIPERGVEPEFDRSLQGIKDLEDELDGHLR
EYKKQFKCSNIQFKDSGKEIYTIEVPMSATKQIPSDWIQMGANKSNKRYYSPGVAKLARS
MAEAREMHKSLEESLKSRLYKKFDLHYQDVWMPTLLAVARMDCILSLARASESLGFPCCR
PSFVDEVDPVTGNKLNGFVNFKELRHPCFNMGTTSTKDFIPNDISLGRDSYQIGLLTGAN
AAGKSTVLRMTCIAVIMAQVGCYVPAEEATLSPIDKIMTRLGANDNIMQGKSTFFVELSE
TKKILDIATNRSLLVLDELGRGGSSSDGFAIAESVLHHVATHIQSLGFFATHYGGLGLGF
KHHPKVKPLKMNIMVDEKSREITFLYKLVEGQSEGSFGMHVASMCGIAKEIVDRAQVAAD
NKEHTSLLVKERREANGGMSEQEIIPLGLQSDFVRLRYGSGLNSGKLGCGEGATLYDSNI
KANALKSIFAMIDGLD
NT seq
3831 nt
NT seq
+upstream
nt +downstream
nt
atggtggccccttccacaccaaaaagtagcaagagaagtttcaaaggctctcctcagtct
tccggcaggaagaatttgaagcaggcttcagtgctttcgttcttcagtaagcacaaaact
ccctccagcactcctcttaagaacaaaaaggtgtcgctttttgttgagaatgatgatatg
accgagaatgaatctggctttgtaactgctttagaggatacaaacaatcactctgtcatt
gaaccagttgatagcagtgcgcctctcgaaaacttggaaaactcgaatgttgggaataac
tctgcgatagcacagtcaggtgtttctttgcttgagcaagatcaccgcaacaaagcacaa
agtgtacaagacgataaaaagggatattcagatatcttgagcagagataatgctagccct
cgagcagatccttcgaggcttgagaacagcaccacgagacaagactctgggcccttggca
gaagacctctcagagacagagggaagaaggaaagccaagagaaacgtcacatatactgag
gacagtgaggacgaagatgacggtaatattgtaaagacagggaagaagagaagaaagcaa
ttgtctagcgacgaagaggaagaatacattccagaaggacaaaataatagtggtgaagac
gatgatgaagcagacctacttgtagaaataggtgcggttgatgctaaaaaagagctgaag
ggcgatgaaagccctttcatggatgatgatgacgatgatgacgacatattgagtttatca
gccaaaaagcccaaagctcgtgccggccccgtaacttcaggctcccctgtagctgtgcgc
tcacccacacatcgcaagcgctctcctcctgcaagagccccaagtcaaacgggaaaagga
aagcattcgggcttcaataaggagaatgaagagcgttaccagtggttggtccacgagcgt
gatgcccaaggaagatccaaggaagatcctgactatgactccaggacgttgtttatccca
tcatctgcttggagtaagttcaccccattcgaaaagcagtactgggaaatcaagagcagg
atgtgggactgtattgttttcttcaagaaaggcaagtttttcgaactatatgaaaaagat
gctttgctaggaaaccaactgttcgacttgaaaattgctggagggggccgggcaaacatg
caattagccggtatcccagaaatgtcgtttgattattgggcaatgcagttcattcagcat
ggatacaaggttgctaaagttgatcaacgggagtctatgcttgcaaaagaaatgcgtgaa
ggtaacaaaggaattgttaagcgcgaactgcagcatgttctcacatctggaactctcact
gactctgggatgcttcaatctgaccaagccacgttttgtttagctataaaggaagaagcg
ggaacatatcacgacactgaaaacggaactgttgaaccctcaaagaccgagagcaagatt
tttggcgtagcgtttatcgacactgcaacaggagaaattgaactactggaatttgaagat
gacagcgagtgttcaaagctagataccttgatgtctcaagttaagcctaaagagataata
atggaaaagaacaatctttgtaaccttgctcataagatcgttaaatttaatgcccaacca
caggcaattttcaactatctaaagcctgtggaggagttttatgattttaataagactttt
gatgaacttacatctactgagacaaaatatttcgccgacatggagcactggccggcggtt
ttgacacattattttgaaaagggaaaaaaggtaggtttttcggctttcggtggactgcta
tcttatttgaaatggctgaagttagatgaagccatgatcacaatgggaaatattaaggaa
tataaccctatcagatcacaaaactcgttggtcttagatggtgttactctacaaaacctc
gaaatattctgtaactcgtttgacaactccgacaggggaacgctattcaaacttcttaat
cgggcaatcactccgatgggaaagagaatgcttaagaaatgggtagtccacccgctatta
caaaaaaaagatatcgaaatgaggcttgacagtgttgatttgcttctgacaaaaatcgaa
ataagggaggtgctagaagacaaactcagccttttgccagacttggaacgtttcttggcc
cgcgtgcactccggagctctgaaaataaaagatttcaacagagttatcgaaggttttgaa
agtataacgggacttattgccaagctccaaaatttcgagctcactggctcacttcaagta
tttttgaatcagatccctgaagctctttcggaaaaagtcgaaggttgggttggtgctttt
gatcgaaagaaagctgtgaacgacggagtcattataccagagcgcggagtggaaccagag
ttcgatcgatcgctgcaaggaatcaaggatttagaagatgaactggatggccatctgcga
gaatacaaaaaacaatttaaatgctctaacatccagtttaaagattcaggaaaggaaatt
tacaccattgaagtccctatgtcagctacgaaacaaataccttccgactggattcaaatg
ggtgctaacaagtccaataaaaggtactactcgcctggagttgcgaagcttgcgagatcg
atggctgaagctcgtgaaatgcacaagtcattagaagaaagcttgaagagcaggctgtat
aaaaaatttgatcttcattatcaggatgtttggatgcccacactgttagcagtagctcgg
atggattgcattctgtcgctagcaagggcttccgaatcactaggctttccgtgctgtagg
ccttcttttgttgacgaggttgatcccgtcacaggaaataagttaaatggattcgttaac
ttcaaagagctcaggcatccatgctttaacatgggcactacctcaacgaaggattttata
ccaaatgatatctcattgggccgcgacagttaccaaataggtcttctcacaggtgcgaat
gcagcaggtaaatcaacagtcttgagaatgacttgcattgctgttatcatggcccaggtt
ggttgctacgttccagcggaagaagcaactttgtctcccattgataaaataatgaccaga
cttggagccaatgacaatataatgcaaggaaagtcgacgttttttgttgaactctcagaa
accaagaaaatattggatatagcaacaaacaggtcattacttgtgttggatgagcttggt
agaggtgggtcttcaagtgatggcttcgcaattgctgaaagtgtcttacaccatgttgca
acacatattcagagtctaggattttttgcaactcactatggtggcctaggcttgggcttc
aaacatcatccgaaagtcaagcccctcaaaatgaatataatggttgatgaaaaatcccga
gaaatcacattcctgtataaacttgttgagggacagagcgaaggcagttttggtatgcat
gttgcttcgatgtgtggaatagcgaaagaaatcgttgacagagcacaagttgcagctgac
aataaggaacacacatctctattggttaaagaacggcgggaagccaatggtggtatgagc
gagcaagaaataattcctttgggccttcagagcgattttgtgaggctgcgctatggaagt
gggcttaattcaggaaagcttggctgcggtgagggtgcaacgttatatgatagcaacatc
aaagccaacgccctgaagagcatttttgccatgattgatgggctcgactaa
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