Lachancea thermotolerans: KLTH0G17424g
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Entry
KLTH0G17424g CDS
T01117
Name
(RefSeq) KLTH0G17424p
KO
K12597
protein AIR1/2
Organism
lth
Lachancea thermotolerans
Pathway
lth03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lth00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
KLTH0G17424g
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lth03019
]
KLTH0G17424g
03016 Transfer RNA biogenesis [BR:
lth03016
]
KLTH0G17424g
Messenger RNA biogenesis [BR:
lth03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
TRAMP complex
KLTH0G17424g
Transfer RNA biogenesis [BR:
lth03016
]
Eukaryotic type
tRNA degradation factors
TRAMP complex
KLTH0G17424g
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-CCHC
AIR2-like_ZnK4
Motif
Other DBs
NCBI-GeneID:
8294080
NCBI-ProteinID:
XP_002555787
UniProt:
C5DNI9
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All DBs
Position
G:1510444..1511391
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AA seq
315 aa
AA seq
DB search
MASLLSESETQDTLPFFEDTAPSFESNERILAPSIDEVDSNPEDLRTLRGSGRYFGVEDP
SDAVQKAEIKCINCSQRGHRKRNCPHVICSYCGLMDDHYSQQCPKAIKCANCNGEGHYRS
QCPHKWKRVKCVHCNSKNHSRDRCPSIWRSYYLLDSNVRRVLPVHKIFCYNCGGKGHFGD
DCWEYRSSRVPNEDGSAFSGENLPQELKADYFRHLDNAGTEYRDSFSLYPEQKKNSHQAS
GGRRFNEAYYDEESSGARSKKSKKRKRDSDKNYSSSPHNSNFYPPPYQRSKSVPKPSSRG
NVLPTKKNKKSELRY
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atggcgtctctgctatccgagtcggaaactcaagacacgttacctttctttgaagatacc
gcgccctcgtttgagtcaaacgagcgaattttagcgccttccattgatgaagttgactca
aatccagaggaccttcggactttgcgaggcagtggccgctactttggcgttgaggatccg
tctgatgctgtacaaaaggcagaaataaagtgtatcaactgttcacagaggggccaccgc
aagcgcaactgcccacatgtgatttgctcgtactgtgggcttatggacgaccattactca
caacagtgccctaaagccatcaagtgtgcaaactgtaatggagagggccactacagaagc
cagtgccctcacaaatggaagcgcgtgaagtgcgttcactgcaacagcaagaaccactcc
agggataggtgccccagtatatggagaagttactacttgttagacagcaatgtccgccgt
gtgctaccggtgcataagattttctgctacaactgtgggggcaaaggtcacttcggggat
gactgctgggagtacaggtcgtcaagagttcccaacgaagacgggagcgcgttttcaggc
gagaacttgccccaggaactcaaagcggactactttcgtcatctcgataatgccggaaca
gagtatcgtgacagcttttctctatatcccgaacaaaagaagaattcgcatcaagcctca
ggcggacgaaggttcaacgaggcatactacgatgaagaaagctcgggtgcccgcagcaag
aagtcaaaaaagagaaagagagacagtgacaagaattactcttcaagcccccacaactcc
aatttttaccctccaccataccagagatccaagagcgttccgaaaccttcttcgcgaggc
aatgttctccccacaaagaaaaacaaaaaatctgagttacggtactaa
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