Lachancea thermotolerans: KLTH0H00638g
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Entry
KLTH0H00638g CDS
T01117
Name
(RefSeq) ATP-dependent RNA helicase DBP8
KO
K14778
ATP-dependent RNA helicase DDX49/DBP8 [EC:
5.6.2.7
]
Organism
lth
Lachancea thermotolerans
Brite
KEGG Orthology (KO) [BR:
lth00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lth03009
]
KLTH0H00638g
Enzymes [BR:
lth01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
KLTH0H00638g
Ribosome biogenesis [BR:
lth03009
]
Eukaryotic type
90S particles
Helicases
KLTH0H00638g
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
Cas3-like_C_2
ResIII
CNOT1_CAF1_bind
AA_kinase
P-loop_SecA
Motif
Other DBs
NCBI-GeneID:
8294219
NCBI-ProteinID:
XP_002555907
UniProt:
C5E1Y4
LinkDB
All DBs
Position
H:complement(64621..65922)
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AA seq
433 aa
AA seq
DB search
MSSEFATLGISKWLVEALQAMKITQPTAIQKACIPQILQGKDCIGGAKTGSGKTIAFGAP
MLTKWSEDPSGMFGVVLTPTRELAMQIAEQFTALGSSMNIRVALVVGGESIVDQAINLQR
KPHFIVATPGRMAHHIMNSGEDTIGGLKRAKFLVLDEADILLTDTFSEHLATCISILPPK
EKRQTLLFTATVTDQVKALQNAPAAEGKPPLFSYEVESMDKVAIPSTLKTTYLLVPEQVK
EAYLYQILTNATYNESSAIIFVNRTVTAEILRRTLKQLDVRVASLHSQMPQQERTNSLHR
FRANAARVLIATDVASRGLDIPTVQLVINYDISSNPDTFIHRAGRTARAGRSGESICFVA
PRDVSRIEAIEERINKKMEEFKDVHDTAVIRKALNKVTVAKRESLMSMEKENFGERRKLH
LKKSGLSKSYRNN
NT seq
1302 nt
NT seq
+upstream
nt +downstream
nt
atgtcaagtgaattcgcgaccttgggcatctctaagtggctggtcgaggccttacaagcc
atgaaaatcacacaaccaacggctattcaaaaggcgtgtattcctcaaattctgcaaggg
aaagattgtataggcggagcgaagacagggtctggtaaaactattgcattcggcgcgcca
atgctcacaaaatggtctgaggaccctagcggtatgtttggggttgtgttaactccaacg
cgagagctggcgatgcaaatcgcagagcagttcacagcacttggaagttccatgaatata
agggttgcattagtagtgggtggcgaaagtatagttgatcaagctatcaatctccaaaga
aagccgcattttatcgttgcgacgcctgggcgcatggctcatcacatcatgaacagtggt
gaggatactatcggaggactgaaaagagccaaatttttagtcctggatgaagcagatata
ttgcttacagacacattcagcgaacaccttgcaacatgcatcagcatacttccccctaag
gaaaaaagacaaactttacttttcacagcgactgtaactgatcaggtcaaagcgcttcag
aacgcgccagccgccgaaggcaaacctccgcttttttcctatgaggtggagagcatggac
aaagtagccattcccagcacactcaaaaccacatatctgctcgtccctgagcaagttaaa
gaagcttatctctaccagatccttactaatgcgacttacaatgagtcgagtgccatcata
ttcgttaatagaacagtaactgccgagattcttagaagaacgctcaagcagctggatgtc
cgcgttgcttcacttcactcccaaatgcctcagcaggagagaacaaactcactgcataga
ttccgagcgaatgctgctcgggtcctcatagctactgacgtcgcgtccagaggtcttgac
attcctaccgtacaattggtcattaactatgatatctcttcgaaccctgatacattcatt
cacagagctggtcgtacagctagagcaggaagaagcggtgaatccatatgtttcgtcgcc
ccgcgagatgtctcgcgcattgaagccatcgaagagcgaattaacaaaaagatggaagaa
ttcaaagatgtgcatgatactgcggtcataagaaaggctctaaataaggtcactgttgca
aaaagggaaagtctcatgtccatggagaaggagaattttggagaacggagaaagcttcat
ctaaagaagagcggcttgagcaaaagctataggaataactag
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