Lachancea thermotolerans: KLTH0H00726g
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Entry
KLTH0H00726g CDS
T01117
Name
(RefSeq) U4/U6-U5 snRNP complex subunit PRP8
KO
K12856
pre-mRNA-processing factor 8
Organism
lth
Lachancea thermotolerans
Pathway
lth03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lth00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
KLTH0H00726g
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lth03041
]
KLTH0H00726g
Spliceosome [BR:
lth03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
KLTH0H00726g
Complex C
U5 SnRNP specific factors
KLTH0H00726g
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
PROCN
PRP8_domainIV
U6-snRNA_bdg
PRO8NT
U5_2-snRNA_bdg
PROCT
RRM_4
Motif
Other DBs
NCBI-GeneID:
8294223
NCBI-ProteinID:
XP_002555911
UniProt:
C5E1Y8
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All DBs
Position
H:72819..80063
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AA seq
2414 aa
AA seq
DB search
MSGLPPPPPPPGFNASVPPPPPPGFRKRTSVSRSEDDFNVKDLKEQLLPPPPPPPMPSSI
SALPPPPPHHHHHKGPDTSKPALKKQKLLSHCLESPRLSVEELKERKREWISSQKKRFRQ
SSSKCARGKTQKRGVIHSHKVDMPPEHLRKIINDHKDMSSKRFIHDKRAFLGALKYMPHA
ILKLLENMPQPWEQVKEVRVLYHNTGALTFVNEIPRVIEPVFTAQWSAAWIAMRREKRDR
RHFKRMRFPPFDDEEPPLSYHEHIQGIEPLDGITLQLDEVDDALIKDWIFDSKPLLDEKS
CVNGSSYKTWSIDHRTMANLHRLSSPLLDSGLDSNKNYLFEKKSFFTAKALNNAIPGGPK
FEPLFSAEEENDINEFNSLDRVIFRVPIRTGYRIAFPHLYNSRPRAVQLSWYHTPIACLA
EETQDENAETFRFDPSFNLISASYGTSRPLSLESEDFLLDANFRPLLSSEKVCLPDTKAA
ISLYHAPYPFNLRSGRTVRAQDVALVKKWYLQKPETDVPVKVRVSYQKLLKNYVLNELKS
SKLGKQSKKKLLRSLRNTKFFQQTSIDWVEAGLQLCTQGFNMLNLLIHRKGLTYLHLDYN
FNLKPTKTLTTKERKKSRFGHAFHLMREILKAIKLLVDAHVQYRLGNVDAFQLADGVYYI
LNHLGQLTGIYRYKYKVMHQIRACKDLKHVVYNRFNRVIGKGPGCGFWQPAWRVWIFFMR
GIIPLLERWLGNLLARQFEGRSSEVIKTATKQRLDAYYDLELRAAVMNDILDMMPEGIRQ
NKSKTILQHLSEAWRCWKANIAWNVPGMPEPIKNIIERYIKAKADGWVSAAHYNRDRIKR
GAHVEKTVVRKNLGRLTRLWIKHEQERQQLIEKNGPEITPLVATTIFKTMVDWLEQNNFS
PVPFPPLTYKNDTKILVLALENLKNAFASKVRLNASEREELALIEEAYDNPHDTLNRIKK
YLLTQRVFKPVDLSMKDQLQTISPVYSVDPLEKITDAYLDQYLWYEADKRQLFPNWIKPS
DTEIPPLLVYKWAQGINNLSEVWDVNNGQSTVLLQTKLEGLAEKIDLTLLNRLLRLVMDP
NLADYITAKNNVVLNFKDMSHVNKYGLIRGLQFSSFVYQFYGLMLDLLILGPQRASELAG
PSQAPNNFLQFKSLDVEKRNPIRLYCRYFDVVHILFHFEEQDSEALVLDFLSENPDPNFE
NAVGYNNKKCWPKDARMRLMRPDVNLGRAVFWEISNRVPISLVNITWENSFASVYSKSNP
NLLFTMCGFEARILPNFRTEEMISFDEGVWDLVDERTKQRTAKTFLRVSDEHVEKFNDTI
RGILMASGSTTFTKITARWNTALISLFTYFREAVVSTESLLDVLVKCETKIQNRVKLGLN
SKMPTRFPPAVFYTPKELGGLGMLSASHILIPASDLSWSKQTDTGITHFRAGMTHEDEKL
IPTIFRYITTWENEFLDSQRVWADYVAKRQEALKQNRRLAFEELEGSWDRGIPRISTLFQ
KDRHTLAYDKGHRARSQFKDFSLERNNPFWWTDTHHDGKLWNLNAYRTDVIQALGGIETI
LEHTLFKGTGFNSWEGLFWEKASGFEDSMQFKKLTHAQRTGLSQIPNRRFTLWWSPTINR
ANVYVGFLVQLDLTGIFLHGKIPTLKISLIQIFRAHLWQKIHESIVFDVCQVLDGEMDML
QIESVEKEAIHPRKSYKMNSSAADVTLSSNHTWNVSSPSLLHNTNDNFNVSNSSKVWIDV
QLRYGDYDSHDISRYVRAKFLDYTTDNVSMYPSPTGVMIGIDLAYNMYDAYGNWFDGLKT
LLQNGMKTIMKANPSLYVLRERIRKGLQIYQSQTQEPFLNSSNYAELFSDETKLFIDDTN
VYRVAVHTTYEGNIATKPINGCIFTLNPKTGELFLKIIHTSVWAGQKRLSQLAKWKTAEE
TSALIRSLPKEEQPKQVIVTRKAMLDPLEVHMLDFPNISIRPTELKLPFSASMAIEKLSD
VVTKATEPQMVLFNIYDDWLERVSSYTAFSRLILLLRALRTNEERAKMILKADPTIPIKE
HHLWPSFSDDQWIEIESQMRDLILVEYGKKYNVNIASLTQTEIKDLILGQNIKAPSVKRQ
QMAELEMSKTTQNSNGLDSSSGSAMKIKSTNAQGEEIMVVTSTNFETQTFSTKNEWRKRA
IANSLLYMRLKTIYLASDDFVEEKDVFILPKNLLKRFVEISDTKAQVAGYIFGKKAAGHE
KVKEIRTIVIVPQLGNTHTVQLSMLPEYSPYLQDLELLGWTHTQSQELKYMSAPEVTTHS
NIFKGEKDLVSLSVCLNPGSISLAAYTVSEEGYSWGSSNKNLFDAEPQGFDPEFSEHAQL
MLSDRVTGNFLVPSNDVWNYAFMSAVFSPSAKYELKLDIPIEFYNELHRSIHFLQFSDMV
ENEELEPEKEDVFA
NT seq
7245 nt
NT seq
+upstream
nt +downstream
nt
atgagtgggcttcctccacctccaccaccacctggcttcaatgcgtcagtgccgccaccg
cctccccctggtttcaggaagagaacctcagtaagcaggagcgaagatgactttaatgta
aaagatttaaaagagcaactgttacctccaccccctccacctccaatgccatcctccatt
tctgcattacctcctccaccgccacaccatcaccaccataagggacctgatacatcaaag
ccagccttaaagaagcaaaagcttctctcacattgtttggaatcccctagactcagcgta
gaagaactaaaggaacgaaagagagagtggatttcctcgcaaaaaaagagatttagacaa
tcctcctccaaatgcgcgagaggaaaaactcaaaagcgaggtgtgatacattcgcataag
gttgacatgccaccggaacatttgcgcaagataatcaatgatcacaaagacatgtcatct
aaaagattcatccatgacaagagagctttcttaggcgcactaaagtatatgcctcacgca
attttgaagcttttagagaatatgcctcagccttgggaacaagtgaaagaagtcagggtt
ttatatcacaatacaggcgctttgacatttgtgaatgaaattccccgtgtaattgagccg
gtattcaccgctcaatggtcagccgcttggatagctatgaggagagaaaaaagggatcgt
cgtcacttcaaaaggatgagatttccgccttttgatgatgaagaaccacccctctcctat
catgaacacatacaaggaattgaaccactggatggtataacgttgcaattagacgaagtt
gacgacgcgctcattaaagactggatttttgattcgaagccgcttttagatgaaaaaagt
tgtgttaacggttcatcatacaagacatggagtatcgatcatcgtactatggcaaacctg
cataggttatcctcaccgcttttagattcagggcttgattcaaataaaaattaccttttc
gaaaagaaatctttcttcactgcaaaagcacttaataatgccattccaggaggccccaag
ttcgagcctttgttttctgccgaagaagagaatgacatcaatgaattcaactcacttgac
cgtgtcatttttcgagttcctataagaacgggctataggatagctttcccacatctctac
aatagcaggccccgcgctgttcagttgtcatggtatcatacgcctattgcctgtttagcg
gaggaaactcaagatgaaaacgccgaaaccttccgttttgatccttccttcaatctcatt
agcgcttcttatggcacgtcgcgccctcttagcttagaaagtgaggattttctccttgac
gccaatttcaggccgcttttgagcagtgagaaagtttgcctgcccgacacaaaagctgca
atcagcctttatcatgcaccatatccatttaacctcaggtcaggaaggaccgtaagagcc
caggatgttgctcttgttaaaaagtggtacctccagaagcccgaaactgacgttccagtc
aaagttagggtctcatatcaaaagcttttaaaaaattacgttcttaatgaacttaaaagt
tcaaagcttggaaaacagtccaagaaaaagctcctaagaagtctcagaaatacgaagttc
ttccagcagacatcgatcgactgggttgaggcagggctgcaactatgcacccagggcttt
aacatgcttaacttgttgattcatcgtaaaggtctaacatatttgcatttagactataac
ttcaatttgaagcccaccaaaacgctgacgacaaaagagcgaaagaaatctagatttgga
cacgccttccatttgatgcgcgaaattctaaaagctataaagcttttagttgatgcacac
gttcagtatcgattgggaaatgttgacgcttttcagcttgcagatggagtttattacatt
ttgaatcacctcggtcagttaactgggatataccgctacaaatataaagtcatgcaccaa
ataagggcctgcaaagatcttaaacacgttgtctataataggttcaacagagttataggg
aagggtcccgggtgtggcttttggcagccggcgtggagagtgtggatcttttttatgagg
ggaataattcctctacttgaaagatggttagggaatcttctcgcccgtcagttcgagggg
cgttctagcgaggtaattaaaacagcaacaaagcagcgcctcgatgcatactacgatctt
gaattgagagccgctgtcatgaatgatatccttgatatgatgcctgagggcattcgtcag
aataaaagcaaaacaattttacagcatctcagtgaggcctggaggtgttggaaagcgaac
attgcatggaacgtgccaggtatgccagaaccaataaaaaacataattgaaaggtacatc
aaagccaaagctgatgggtgggtatcagcagctcattataaccgtgaccgaattaaacgg
ggtgctcacgttgaaaagacagtcgtccggaaaaatctagggaggttgacacgtttatgg
atcaagcatgaacaagaaagacaacagttgattgagaagaacggtcctgagattacgcca
cttgtggcaacaactatctttaaaactatggttgactggttagaacagaacaatttttct
cctgtacctttcccacctctcacgtataaaaatgatacaaagatccttgtgctagcctta
gagaaccttaagaatgctttcgcgtccaaagtgcgtcttaacgcttctgagagagaagag
cttgctttaattgaggaagcgtatgataatcctcacgatacgctaaaccgcatcaagaaa
tatttacttacacagcgggttttcaaacctgttgatctctctatgaaagaccagcttcaa
actatttcacctgtctattcagtggatccattggagaaaatcactgatgcttatcttgat
caatacctttggtatgaagcagacaagcgccaattgttcccaaattggataaaaccaagt
gacactgagattcctccgttgctagtatacaaatgggctcaaggcatcaataacttaagt
gaggtctgggatgttaacaatggccagtcaacagttttgctacaaacaaaattagaggga
cttgctgagaaaattgatttgacgctattgaacagattgctcaggcttgtaatggatcca
aacctggcagattatattactgcaaaaaacaatgtcgtcttgaattttaaagacatgagt
cacgttaataaatacggcctcattcgaggattacagttttcctctttcgtctaccaattc
tacggtttgatgctggatcttttgattttgggacctcaaagagcttctgaattagcaggg
ccatcacaagctccaaacaactttttacagtttaaaagtttggatgttgaaaagagaaat
cccattaggttatattgccggtacttcgatgtcgtgcacattctattccattttgaagag
caagattcagaggcccttgtgctagattttctttctgaaaaccctgatcctaatttcgaa
aacgcagttggttacaacaacaaaaagtgttggcccaaggacgcgagaatgagattgatg
cgtccagacgttaatctcggaagggcagttttctgggaaatttctaaccgcgttccaatt
tctcttgtaaacataacatgggaaaactcttttgcatctgtttatagcaagtccaatcct
aatttgctattcactatgtgcggatttgaggctaggattttaccaaactttagaacagaa
gaaatgatatctttcgatgaaggagtatgggatttagttgacgagagaacaaaacaaaga
acagcaaaaacctttttgcgggtttcagatgaacacgtcgaaaaattcaatgataccatt
agagggatcctaatggcctcaggatctaccacttttactaagataacagcaaggtggaat
actgcattgatttctctgtttacgtattttagagaggctgttgtttcaactgaatcactt
cttgatgttttggttaaatgtgaaacaaaaatccagaatagagtcaagcttggtttaaat
tcaaaaatgccaacaaggtttcctccagcggttttctatacccccaaggagcttggaggg
cttggcatgttaagtgcttctcacattctgatccccgcatccgacctaagttggtctaaa
caaacagatacggggatcactcatttccgggcaggaatgacacatgaagatgaaaaatta
attcctaccattttccggtatattactacttgggaaaacgagtttcttgattcgcaaaga
gtttgggcggactacgtagctaaacgtcaggaggccctcaaacaaaacaggcgtttagct
tttgaagaactagaaggatcttgggatcgcggtattcctcgaattagcaccttgtttcaa
aaagatcgccacactttggcatatgataagggccatagagctcgttctcaatttaaagac
ttttctttagagcgcaacaatccattttggtggacagatacacatcacgatggtaaattg
tggaatcttaacgcttatcgcacagatgtcatccaggcccttggtggtattgaaacaatt
ttagaacacacgctgttcaaaggcactgggttcaactcttgggaagggctgttttgggag
aaggcatcggggttcgaagactcgatgcaattcaaaaaactaacacatgcccaaagaact
ggattgagccaaattcccaaccgtagatttaccttgtggtggtcgcctacaatcaacaga
gcaaatgtttatgttggatttttagtccaacttgatctcactggtatatttttgcatggt
aaaatcccaactttaaagatatctttgattcaaattttcagggctcatttgtggcaaaag
atccacgaaagtattgtgtttgatgtttgccaagtattggatggtgagatggatatgctg
caaatcgagtctgttgaaaaagaagcaatacaccctcgcaagtcttacaagatgaattcg
tctgctgctgatgtaactttgtcaagcaatcacacttggaatgtctctagcccatcccta
cttcacaatacaaatgataatttcaacgtgtctaactcgagcaaggtatggatagacgtc
caacttagatatggagattatgattctcacgatatttcgcgctacgtcagggcaaagttt
cttgattacactactgataatgtcagtatgtatccttcgccgactggcgttatgatcgga
attgacttggcttataacatgtatgatgcatacggcaactggttcgacggtttaaaaacg
ttgttacaaaacggtatgaagacaataatgaaagccaacccatcgttgtatgttctacgc
gaacgcatcaggaagggcctgcaaatttaccaatcccaaacccaagaaccgtttttgaac
tcgtccaattatgctgaacttttcagcgacgagaccaagttattcattgatgataccaac
gtctatcgagtcgcagttcatacaacttacgagggaaatattgcgaccaaacctatcaat
ggctgtatctttactttaaaccctaaaactggtgaacttttcttgaaaattatacacaca
tcagtatgggcgggtcaaaagcgtctaagccagttagcaaaatggaaaacagctgaagaa
acgagcgctttaataaggtcgcttcctaaagaagagcagccaaagcaagtaatcgttacg
cgtaaggccatgctagaccccttagaggtccacatgcttgacttcccaaacatctcaatt
aggccaactgaattaaaacttccattttcggcatcaatggcaattgaaaagctttcggac
gttgtcacgaaggcaacggagcctcaaatggttcttttcaatatatacgatgattggctt
gagcgagtatcatcttacacagctttttcaaggttgattcttcttttgagggcattacgg
accaacgaagaaagggcaaagatgattttgaaggcagacccaactatacctatcaaagag
caccatttatggccttcgttttcagatgatcagtggattgagatagaatcccaaatgaga
gacctcattctcgtggaatatggcaaaaaatataacgttaacattgcatcgttaacgcaa
actgaaataaaggatctgatattgggtcaaaacattaaggcaccatctgtgaagaggcaa
caaatggctgagcttgagatgtcaaagacaacccaaaattcaaatggtctggattcgtcc
tcaggttccgccatgaaaattaaaagcacgaatgcgcagggagaagaaattatggttgtg
acttcaactaacttcgagacacaaacattcagcacgaaaaatgaatggcgtaagcgcgct
atagcaaattctttactttacatgcgtctgaaaaccatttacctggcgtcagatgacttt
gtcgaagaaaaagatgttttcattctacccaaaaacttactgaagaggttcgtggagatt
tcagacacgaaggcgcaggttgcgggttacattttcggtaagaaagcggctggtcatgaa
aaagtcaaagaaattaggaccatagttatcgtacctcaactgggcaatactcataccgtt
cagttaagtatgctcccagagtactcgccttatttgcaggatttggaattgctagggtgg
actcacacacaaagccaggagctcaaatatatgtccgcccctgaggtcacaacacattcg
aatattttcaaaggcgagaaagacctggtgagtttgtctgtatgcctgaatcctggatcg
atctcgttggcagcctacactgtttctgaggaaggatattcctggggctcatcgaataag
aatctgtttgacgcagaaccacaaggatttgaccccgaatttagtgagcacgcacagttg
atgctttcagaccgtgttactggcaacttcttagttccatcaaacgatgtttggaattac
gcgtttatgagcgcagttttcagtccttcagctaaatatgagcttaagctggatattcca
atcgagttctacaacgaactgcatcgctcaattcatttccttcaattcagcgacatggtg
gaaaatgaagaacttgagccagagaaagaagacgtttttgcatag
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