Lachancea thermotolerans: KLTH0H01320g
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Entry
KLTH0H01320g CDS
T01117
Name
(RefSeq) CCR4-NOT core subunit CDC36
KO
K12605
CCR4-NOT transcription complex subunit 2
Organism
lth
Lachancea thermotolerans
Pathway
lth03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lth00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
KLTH0H01320g
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lth03019
]
KLTH0H01320g
Messenger RNA biogenesis [BR:
lth03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
KLTH0H01320g
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
KLTH0H01320g
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
NOT2_3_5_C
Motif
Other DBs
NCBI-GeneID:
8294248
NCBI-ProteinID:
XP_002555935
UniProt:
C5E212
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Position
H:125017..125589
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AA seq
190 aa
AA seq
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MEKYGLSALLPLIRREDQSPDYDSSMTLGIDLSPVLHSLGIPNNQPSRNRVLDTFQSPWV
ETSRSEVEPKFFVPESFKNIPNVLQSGERPPAFNSVQQDHAKISLFQDETLFYLFYKHPG
SVVQELTYLELRKRNWRYHKTLKVWLTKDPMMEPVVAPGGASERGSYVFFDPQRWEKCQR
DFVLFYNAIM
NT seq
573 nt
NT seq
+upstream
nt +downstream
nt
atggagaaatacggactgagtgcactgctgccactcataaggcgcgaggatcaatcacca
gattacgactcctcaatgacattgggaattgacctttccccagtactgcattcccttggc
atcccaaataaccagccgtcaagaaaccgcgttctcgacacgtttcagtctccatgggtt
gaaacctcgagaagtgaagtagaaccaaagttcttcgtcccagagtcattcaagaacatc
cctaacgtcctgcaatccggcgagaggcccccggcgttcaactcggtgcagcaagaccac
gcgaaaatctcacttttccaagacgaaacgttgttttacctgttttataaacatccaggt
agtgttgtacaggagttgacttacttggaactacgcaaacgcaactggagataccacaag
acgctgaaagtatggctcacgaaagacccgatgatggagccggtggtagcgcccggcggc
gctagcgaacgtggttcgtacgttttcttcgatcctcaacggtgggagaagtgccagcgg
gacttcgtgcttttctacaacgcgataatgtga
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