KEGG   Lachancea thermotolerans: KLTH0H01320g
Entry
KLTH0H01320g      CDS       T01117                                 
Name
(RefSeq) CCR4-NOT core subunit CDC36
  KO
K12605  CCR4-NOT transcription complex subunit 2
Organism
lth  Lachancea thermotolerans
Pathway
lth03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:lth00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    KLTH0H01320g
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:lth03019]
    KLTH0H01320g
Messenger RNA biogenesis [BR:lth03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     KLTH0H01320g
  mRNA degradation factors
   3'-5' decay
    Ccr4-NOT complex
     KLTH0H01320g
SSDB
Motif
Pfam: NOT2_3_5_C
Other DBs
NCBI-GeneID: 8294248
NCBI-ProteinID: XP_002555935
UniProt: C5E212
LinkDB
Position
H:125017..125589
AA seq 190 aa
MEKYGLSALLPLIRREDQSPDYDSSMTLGIDLSPVLHSLGIPNNQPSRNRVLDTFQSPWV
ETSRSEVEPKFFVPESFKNIPNVLQSGERPPAFNSVQQDHAKISLFQDETLFYLFYKHPG
SVVQELTYLELRKRNWRYHKTLKVWLTKDPMMEPVVAPGGASERGSYVFFDPQRWEKCQR
DFVLFYNAIM
NT seq 573 nt   +upstreamnt  +downstreamnt
atggagaaatacggactgagtgcactgctgccactcataaggcgcgaggatcaatcacca
gattacgactcctcaatgacattgggaattgacctttccccagtactgcattcccttggc
atcccaaataaccagccgtcaagaaaccgcgttctcgacacgtttcagtctccatgggtt
gaaacctcgagaagtgaagtagaaccaaagttcttcgtcccagagtcattcaagaacatc
cctaacgtcctgcaatccggcgagaggcccccggcgttcaactcggtgcagcaagaccac
gcgaaaatctcacttttccaagacgaaacgttgttttacctgttttataaacatccaggt
agtgttgtacaggagttgacttacttggaactacgcaaacgcaactggagataccacaag
acgctgaaagtatggctcacgaaagacccgatgatggagccggtggtagcgcccggcggc
gctagcgaacgtggttcgtacgttttcttcgatcctcaacggtgggagaagtgccagcgg
gacttcgtgcttttctacaacgcgataatgtga

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