Lachancea thermotolerans: KLTH0H03608g
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Entry
KLTH0H03608g CDS
T01117
Name
(RefSeq) coatomer subunit beta'
KO
K17302
coatomer subunit beta'
Organism
lth
Lachancea thermotolerans
Brite
KEGG Orthology (KO) [BR:
lth00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lth04131
]
KLTH0H03608g
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lth04147
]
KLTH0H03608g
Membrane trafficking [BR:
lth04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
KLTH0H03608g
Exosome [BR:
lth04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
KLTH0H03608g
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B-prop_COPA_B_2nd
TPR_COPA_B
WD40
WD40_WDHD1_1st
WD40_Prp19
Beta-prop_EML_2
WD40_CDC20-Fz
WDR55
Beta-prop_TEP1_2nd
Beta-prop_WDR75_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
EIF3I
Beta-prop_RIG_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_C
Beta-prop_EIPR1
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_1st
Beta-prop_Nup120_160
Beta-prop_SCAP
Beta-prop_IFT140_1st
BBS2_Mid
Beta-prop_DCAF4
Beta-prop_DCAF12
TPR_GEMI5
Motif
Other DBs
NCBI-GeneID:
8294351
NCBI-ProteinID:
XP_002556038
UniProt:
C5E2B5
LinkDB
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Position
H:join(327747..327764,327941..330550)
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AA seq
875 aa
AA seq
DB search
MKLDIKKAFSNRSDRVKGIDFHPTEPWVLTTLYSGRVEIWNFETQTEVKSITVTETPVRA
GKFIARKNWIVVGSDDFKIRVFNYNTGEKIADFEAHPDYIRSIAVHPTRPYVLSASDDLT
MKFWNWEKNWSLEQTFEGHEHFVMGVAFNPKDPSTFASACLDHTVKIWSLGQPTANFTLH
AHETRGVNYVDYYPLQDKPYLITSSDDRTVKIWDYQTKSCVATLEGHMANVSFAVFHPAL
PIIISGSEDGTLKVWNSNTYKLEKTLNLGLERSWCIATHPTGKRNYVASGFDNGFTVLSF
GNDDPKLSLDPVGKLVWCGGKNASATDVFTAAIRGTEGADDGEPLPLQTKELGNVDVFPQ
SLKHSPNGRFVTVVGDGEYIVYTALAWRNKAFGKCHDFVWGPDSNSYALIDESGHVKFHK
NFKELTSWSIPLEFGVEKLYAGALLGVKADGFVYFFDWDSGSLVRRIDVDANDVVWSENG
ELLMIINNVDENNTEERAAYVLGFNREAYESFLASEEEPSEDGIDEAFDVLYEVSDPIGS
GKWVGDVFIFTTKTNRLNYFVGGKSYNLAHFDKEMYMLGYLPRDNKVYLADRDIHIYSYE
ISIEVLEFQTLVLRGELEQAKTSVLPNIEGKENLLKISRFLEGQEYHEDALEISPDNDQK
FDLALKLSKLSLAHDIVAGDDNEFKWRKLGDKALEGFDFQLAIEAYDNAADLESLFLLYS
SFKDQAGLVDVGDRAQRLGKYNLAFNAYWSAGDVDRARDLLVSSGRYSEAAVLSKAYGGK
LEDTNAIVAQWKESLIEVGKAGVASRIHELSKADQVSAEEPLIDIETEAGQGEKQPVGEP
LEEAATDETPTDGTPTDETPPETHAEDEAAQNLQE
NT seq
2628 nt
NT seq
+upstream
nt +downstream
nt
atgaaattggacatcaaaaaggccttctcaaataggtcggacagggttaaagggattgac
ttccatcccacggaaccttgggttttgaccacactctattcgggccgcgtcgagatttgg
aacttcgaaacgcagacagaggtcaaatctataaccgtaaccgaaactcctgttagagcc
ggtaaattcatcgcgagaaagaactggatcgttgttggatcggacgatttcaaaatcaga
gtgttcaactacaatacaggtgagaaaattgcagactttgaggctcacccagactacatt
cgttctatcgctgtccacccaacaagaccatatgtgctttccgcctcggatgacttaacc
atgaagttttggaactgggagaagaattggtctttggagcagactttcgagggccatgag
cacttcgttatgggcgtggctttcaaccctaaagatccaagcacatttgcttccgcctgt
cttgaccacacagtcaagatatggtctttgggtcagccaaccgcaaacttcactttacat
gcccatgaaacgcgcggtgtcaactacgtggactactatccgctccaggacaagccttac
ctaattacaagttctgatgatcgcacggttaaaatctgggactaccagaccaagtcttgt
gtagcaacactcgaggggcatatggcaaatgtctcttttgcggtattccatcctgctctt
ccaatcatcatttctggctccgaggatggcactttgaaggtttggaactccaatacatac
aaacttgaaaagacgctaaatttgggactcgagaggagttggtgtattgcgacccatccc
acaggaaaacgaaactatgttgcatctggttttgacaacgggtttaccgttctttcattt
ggcaacgatgacccaaagctttcgctagatccagttggcaagctcgtgtggtgtggtggc
aagaacgcgtcggcaacagatgtctttacagcggccattaggggtactgagggggctgat
gacggcgaaccattaccactacaaacaaaagagttgggaaatgtcgatgttttcccacag
tcactaaagcactctccaaacggcaggtttgttacggttgttggcgacggggaatacatt
gtctacaccgcgttggcttggagaaacaaagcgtttggtaaatgtcacgactttgtctgg
ggtcccgattccaatagctatgctttaatcgatgagtcaggccacgttaaattccacaaa
aacttcaaggagctcacttcttggtctataccactggagtttggcgtcgagaaactttat
gcgggcgccttactgggggtaaaagctgatggctttgtgtacttcttcgactgggactct
ggttcacttgtgagaagaattgacgtcgacgccaacgacgtcgtctggtccgagaatggc
gagctcctcatgattatcaacaacgttgacgagaataacaccgaagagcgtgccgcgtac
gtcctaggtttcaacagggaggcttatgaaagctttttagctagcgaagaggaaccctca
gaagatggcattgatgaggcttttgacgtcctttacgaagttagcgatccaatcggctcc
ggtaaatgggtcggcgatgttttcattttcaccactaaaacaaacagattaaactacttc
gtgggtggaaagtcttacaacttggcacatttcgacaaagaaatgtacatgttaggatac
ttacctcgcgacaacaaggtttacctggctgatcgtgacatccacatttacagctacgag
atatccattgaggttcttgaattccaaactttagttttaagaggtgagcttgagcaggcc
aagacatctgttttgcctaacattgagggcaaagagaatttactgaaaatttccagattc
ttggaaggtcaagaataccacgaggacgcattggagatcagtcctgacaatgatcagaag
tttgatctggccttaaaactgagtaaactttcactggcccacgacattgtggcgggcgac
gacaacgagttcaaatggaggaaacttggtgacaaagcgctagaagggtttgatttccaa
ctggcaattgaagcttatgacaacgcggcagacttggaatcattgtttttgctgtattct
tcattcaaggatcaggctggattggtcgacgtgggtgatagagcacagaggctagggaag
tacaacctagcttttaatgcatactggagtgcaggcgatgttgaccgtgctagagacctt
ttggtgtcaagtgggaggtattccgaggctgcagtactttcgaaggcttatggtggaaag
ctcgaagacacaaacgctattgttgcacaatggaaagagagtctaatcgaagttgggaaa
gcaggcgttgcgtccagaatccacgaactcagcaaagcggatcaagtatccgctgaagaa
ccattgattgacatagaaaccgaggctggtcagggggagaagcaacctgttggcgagcct
ctcgaggaagctgcgacagatgaaacccctacagatgggacccctacagatgagacccct
cctgagactcatgcggaagacgaagctgcgcagaatctccaagaatga
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