KEGG   Lachancea thermotolerans: KLTH0H04224g
Entry
KLTH0H04224g      CDS       T01117                                 
Name
(RefSeq) DNA-directed RNA polymerase II core subunit RPB9
  KO
K03017  DNA-directed RNA polymerase II subunit RPB9
Organism
lth  Lachancea thermotolerans
Pathway
lth03020  RNA polymerase
lth03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:lth00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    KLTH0H04224g
  09124 Replication and repair
   03420 Nucleotide excision repair
    KLTH0H04224g
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:lth03021]
    KLTH0H04224g
   03400 DNA repair and recombination proteins [BR:lth03400]
    KLTH0H04224g
Transcription machinery [BR:lth03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     KLTH0H04224g
DNA repair and recombination proteins [BR:lth03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      KLTH0H04224g
SSDB
Motif
Pfam: Zn_ribbon_RPB9 Zn_ribbon_TFIIS DUF7577 Zn_ribbon_InsA
Other DBs
NCBI-GeneID: 8294379
NCBI-ProteinID: XP_002556066
UniProt: C5E2E3
LinkDB
Position
H:383808..384176
AA seq 122 aa
MTTFRFCRDCNNMLYPREDKDNQRLLFECRTCTYAEEAGTPMVYRHELITNIGETAGVVQ
DIGSDPTLPRSDRECPRCHSHENVFFQSQQRRSDTSMVLFFVCLGCSHIFTSDQKNKRTA
FS
NT seq 369 nt   +upstreamnt  +downstreamnt
atgacgacgttcagattttgcagagactgcaacaacatgctgtatccccgtgaagacaag
gacaaccagaggcttttgttcgagtgtcgtacctgcacatatgccgaagaggcggggacg
ccgatggtgtatcggcacgagcttatcacaaacattggtgagactgcgggtgtagtacag
gatatcgggtcggaccccacgctcccgcggtctgacagagagtgcccacgctgccactcg
catgaaaacgtattcttccagtcgcagcagcggcgcagcgacacgtcgatggtgctgttt
ttcgtgtgcctggggtgctcgcacatcttcaccagtgaccagaagaacaagcgaacggct
ttcagctag

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