Lachancea thermotolerans: KLTH0H05566g
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Entry
KLTH0H05566g CDS
T01117
Name
(RefSeq) chromatin-remodeling ATPase ISW1
KO
K11654
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 [EC:5.6.2.-]
Organism
lth
Lachancea thermotolerans
Pathway
lth03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
lth00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
KLTH0H05566g
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lth03021
]
KLTH0H05566g
03036 Chromosome and associated proteins [BR:
lth03036
]
KLTH0H05566g
Transcription machinery [BR:
lth03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
NoRC (nucleolar remodeling complex)
KLTH0H05566g
Chromosome and associated proteins [BR:
lth03036
]
Eukaryotic type
Chromatin remodeling factors
CHRAC complex
KLTH0H05566g
RSF complex
KLTH0H05566g
WICH complex
KLTH0H05566g
B-WICH complex
KLTH0H05566g
NORC complex
KLTH0H05566g
BRF complex
KLTH0H05566g
NuRF complex (fruit fly)
KLTH0H05566g
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
SLIDE
HAND
Helicase_C
ResIII
HDA2-3
DEAD
SWI2_SNF2
ERCC3_RAD25_C
DEAD_2
AAA_14
Motif
Other DBs
NCBI-GeneID:
8294436
NCBI-ProteinID:
XP_002556121
UniProt:
C5E2J8
LinkDB
All DBs
Position
H:493448..496768
Genome browser
AA seq
1106 aa
AA seq
DB search
MDDQEYLEKLKPFQEGLPPSDPESNKKRYLIKGQQKSEFDLEGTIKRFQHLLNLSGLFRH
FIERKAAKDEKFQKVLNILDNPSGRKGSKGSSHQDKRRRKTETEEDQELLKDEEGEEQDQ
VGYQFRESPPFVNGQLRPYQIQGLNWLVSLHQSNLAGILADEMGLGKTLQTISFIGYMRY
VEKKRGPFVVIAPKSTLNNWLREINRWTPEVNAFILQGDKEERAKLVSNKLMACDFDIVV
ASYEIIIKEKSSFKKIDWEYIIIDEAHRIKNEESMLSQVLREFTSRNRLLITGTPLQNNL
HELWALLNFLLPDVFSDSQAFDDWFSSESSEEDKGTIVKQLHTVLQPFLLRRLKNEVETS
LLPKKELNLYIGMSAMQKRWYKQILEKDLDAVNGANGSKESKTRLLNIMMQLRKCCNHPY
LFDGAEPGPPYTTDEHLVYNSAKLKVLDKLLRKFKEEGSRVLIFSQMSRLLDILEDYCFF
RNYEYCRIDGSTAHEDRIEAIDEYNAPDSKKFVFLLTTRAGGLGINLTTADVVVLYDSDW
NPQADLQAMDRAHRIGQKKQVKVFRLVTDNSVEEKILERATQKLRLDQLVIQQSRNGVAN
KEAKKGDSKDALLSMIQHGAADVFSSNSGDSSTKGTPQPGSTDDVDGDIDLDNLLANSED
KTQSLNQKYEALGLDDLQKFNQDSAYEWNGQDFKKRANKDIISTAWINPSKRERKENYNI
DGYYKDVLNPGRSTTPAQPKMPRPQPFHSHQLLSPQLKVLYEKERMWNTKKNNYVPTLED
VKTTYGEIEDEEEKQAKLNMLLLAVANAQPLTEEEEKQKAQLESEGYTNWNKNDFRKFIA
ACGKYGRNSIKAIAFEFAPHKTEEEVRDYAKAFWTNIQRVEDYERYLKNIEAEEDRIRRT
KLQQEALRRKIAQCSNPLFDLTLKHPPSNSNKRVFSEEEDRFLLLMLFKYGIDRENVYEL
VRDEIRDSPLFELDFFFQSRTPIELNRRAITLLQCLEKEFNAGVVLDDGMKRRLAEEDEN
AKNMAEEVKEGAAEAGSEAAPGPGGADVAGKAMEPAPANGELNGKRPREEEDTAATAVAA
AMTSTEPGPADKPSVNGDAKKPKTEQ
NT seq
3321 nt
NT seq
+upstream
nt +downstream
nt
atggacgaccaagagtatctagaaaagctcaagccctttcaggaagggcttcccccatcg
gacccagaatcaaacaaaaagcggtacctaataaaaggccaacagaagagcgaatttgat
cttgagggcactataaagcggtttcaacatctgctcaatttgagtgggctttttcgtcat
tttatagagaggaaagccgccaaagatgaaaaattccaaaaagtcctaaatattctggac
aacccatcaggtcggaagggctctaaaggatctagccatcaggacaaaagaagacgcaaa
accgaaaccgaggaggaccaggagctcctgaaggatgaagaaggggaggaacaagaccag
gtcgggtaccagttccgcgaatcgcccccatttgtcaatggacagctgagaccttatcag
attcaaggcttgaactggctggtttctcttcaccaaagcaatcttgcgggtattcttgca
gatgaaatgggtctaggaaaaactctccagacaatttcgttcatcggctacatgcgttat
gtcgagaaaaagcgtggcccatttgtggtaatcgctcctaaatctactctcaacaactgg
ctaagagaaatcaacagatggacccccgaggttaacgctttcattctccaaggtgacaaa
gaagagagagcaaaactcgtatccaacaagctgatggcatgcgacttcgacattgtggtg
gcttcttatgagatcatcatcaaagaaaagtcttctttcaaaaagattgattgggaatat
atcatcatcgatgaggcccacaggattaaaaatgaggagtctatgctatcacaggttctg
agagagttcacctctcggaataggttgttgattacgggtacgcctttacaaaacaacctg
catgagctttgggcattgttgaatttcctactgcccgacgtcttttctgattcgcaagct
tttgatgattggttttcgtctgagtctagcgaagaagacaagggcacgattgttaaacaa
ctgcatacggtcttgcaaccgttcctgttgcgaagactgaaaaatgaggttgaaacgtca
cttctcccaaagaaggagttgaacctctatatcggaatgtctgccatgcagaaaagatgg
tacaagcaaattctggaaaaggacttggatgccgttaacggagcaaacggcagcaaagag
tcgaagaccagattgctcaatatcatgatgcagttgagaaagtgctgcaatcacccttac
ttattcgatggtgcggagccagggcctccatacaccactgacgagcaccttgtttacaat
tctgctaaactcaaggtgctagataagcttttaagaaaattcaaggaagaaggatctcgt
gttcttattttcagccagatgtcccggttgctcgatatactagaggattattgtttcttt
agaaactacgaatattgtaggattgatggctcaacggcacacgaagacagaatagaagcg
atcgacgaatataatgcgcccgactcgaaaaagttcgtttttctgctgaccactcgtgcc
ggtggcttaggcatcaacctgacaactgccgatgttgttgtattatatgattccgactgg
aaccctcaggctgatttacaagctatggatagagcccaccgcatagggcaaaagaagcag
gttaaggtgttcaggctggtcactgacaattctgtcgaagagaagattctcgaaagagca
acacagaagcttcgactcgaccagctggtcattcagcagagcagaaacggggttgctaat
aaagaagccaagaaaggcgactcaaaggacgcccttttgtcgatgattcaacacggtgca
gctgatgttttcagctcaaacagtggtgattctagcactaaggggacgcctcaaccaggc
tcgaccgacgacgttgacggagatattgaccttgataacttgctggcgaactcggaagac
aagacgcaatccttgaaccagaaatacgaagctctaggattggacgacttacagaaattc
aaccaggattccgcttacgagtggaatggtcaagacttcaaaaagcgcgctaacaaggac
attattagcacggcttggatcaaccccagcaaacgtgagcgtaaggagaattataatatt
gacggctactacaaggacgtgctgaaccccgggcggtcgacgacgcctgcgcaacccaaa
atgccaagacctcagccgttccacagccatcagttgttgtccccgcagctgaaggtcctt
tacgaaaaggaaaggatgtggaacaccaagaagaacaactacgttcccacgctggaagac
gtcaaaacaacgtacggagaaatcgaggacgaggaggaaaaacaagccaagctgaacatg
cttctgctagcggttgctaacgcccaaccattgactgaagaggaagaaaaacagaaagcc
cagctggagtctgagggatacacgaactggaacaaaaatgatttcagaaagttcattgct
gcctgcggcaagtatggccgaaactctatcaaggccatcgccttcgaattcgcgccacac
aagaccgaggaggaagtgcgcgactatgccaaagcattctggacaaacatacagcgcgtc
gaggactacgagcggtacctgaagaacatcgaggcggaggaagataggatccgccgcaca
aagctgcagcaagaggcgctgcgccgcaagatcgcacagtgcagcaacccgctgttcgac
ctgacactcaagcatccgccctcaaacagcaacaagcgggttttctccgaagaggaggac
cgtttcttgctgctcatgctattcaagtatggcatcgaccgggagaatgtctacgaattg
gtcagggacgagatccgcgactcgccgctgttcgaactggactttttcttccaaagccgg
acgcccatcgagctcaacaggagagcgatcacgttgttgcaatgtcttgagaaggagttt
aacgccggcgtagtgctcgacgacgggatgaagcgcaggcttgcagaggaggacgaaaac
gcaaaaaacatggcggaagaggtcaaggagggcgctgcggaggctggctcggaagctgcc
ccgggcccggggggcgcggacgtagcaggcaaggccatggagcccgcacctgcgaatggt
gagctcaatggtaagaggccccgagaagaagaggacaccgccgccaccgccgtggcggcg
gccatgacctcgacggagcccggacccgcggacaagcccagcgtcaacggcgacgccaag
aagcccaagaccgagcagtag
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integrated database retrieval system
