KEGG   Lachancea thermotolerans: KLTH0H05610g
Entry
KLTH0H05610g      CDS       T01117                                 
Name
(RefSeq) KLTH0H05610p
  KO
K14299  nucleoporin SEH1
Organism
lth  Lachancea thermotolerans
Pathway
lth03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:lth00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    KLTH0H05610g
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:lth03019]
    KLTH0H05610g
   04131 Membrane trafficking [BR:lth04131]
    KLTH0H05610g
Messenger RNA biogenesis [BR:lth03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     KLTH0H05610g
Membrane trafficking [BR:lth04131]
 Autophagy
  Other autophagy associated proteins
   SEACAT/GATOR2 complex
    KLTH0H05610g
SSDB
Motif
Pfam: Beta-prop_THOC3 WD40 Beta-prop_WDR5 Beta-prop_IFT122_1st WD40_CDC20-Fz WD40_WDHD1_1st WD40_Prp19 Beta-prop_WDR3_1st Beta-prop_CAF1B_HIR1 WD40_MABP1-WDR62_2nd Beta-prop_EML_2 ANAPC4_WD40 Beta-prop_WDR3_2nd Beta-prop_WDR36-Utp21_2nd Beta-prop_RIG_2nd Beta-prop_TEP1_2nd EIF3I Beta-prop_WDR90_POC16_2nd Beta-prop_WDR35_TULP_N Beta-prop_EML Beta-prop_IFT140_1st
Other DBs
NCBI-GeneID: 8294438
NCBI-ProteinID: XP_002556123
UniProt: C5E2K0
LinkDB
Position
H:complement(498715..499734)
AA seq 339 aa
MKPFITGHEDLVHDVVYDFYGRHVATCSSDQHIKVFRLDRETNEWQLSDSWKAHDSSVVG
LDWASPEYGRIIASVSYDKLVNLWEEEPDAEECSGRRWTKLCTLNDATGPLFSVKFAPGH
LGLKLGAIGNDGTLRIYEAMEPSDLRSWTLTSEVKVLPSPPASHLQSDFCLTWCPSRFSP
EKLLVCALDQALIYQKDKAGKPYVAAKLEGHTALIRSVSWAPSVGRWYQLIATACKDGKV
RIFKLTETLGASEDAMSVDQDEDADADAGSADTSADTPPELKVELVSESDDHHGEVWSVS
WNLTGTILSSAGDDGKVRLWKASYSNEFKCMSVISAEQK
NT seq 1020 nt   +upstreamnt  +downstreamnt
atgaagcctttcataacaggacatgaggacttggtgcatgacgtggtgtacgacttctac
gggagacacgtcgcaacgtgctcttcggaccagcacatcaaagttttcaggttggaccgc
gagaccaacgagtggcagctgagcgactcgtggaaagcgcacgacagctccgtggtgggg
ctggactgggccagtccagagtacggcagaatcatagcgtctgtgtcgtacgacaagctg
gtgaacctgtgggaagaagagcccgatgccgaggagtgctctggccggcgctggacgaag
ctgtgcacattgaatgacgcgacgggcccgctgttcagcgtgaagttcgcgccgggccac
ctgggcctgaagctgggcgcgattggcaacgacggcactctgaggatatacgaggcgatg
gagccgtccgacctgaggtcgtggacgctgacgtcggaggtcaaggtgctgccatcgccg
ccggcgtcgcacctgcagtcggacttctgtctgacgtggtgcccgtcgcggttctcgccc
gaaaagctgctggtgtgcgcactggaccaggcgctcatataccagaaggacaaggcgggc
aagccctacgtggccgcgaagctggagggtcacacggcgctgattcggagcgtgagctgg
gcgccgtcggtggggcggtggtaccagctgatcgcgacggcgtgcaaggacggcaaggtg
cgcatattcaagctcacggagacgctcggggccagcgaggacgcgatgagcgtggaccag
gacgaggacgcggacgcggacgccggctcggcggacacgtcggcggacacgccgccggag
ctgaaggtggagctcgtgagcgagagtgacgaccaccacggcgaggtgtggtccgtgtcg
tggaacctgacgggtacgattttgagctccgcgggcgacgacggcaaggtgcggctgtgg
aaggcctcgtactcgaacgagttcaagtgcatgtctgtgatcagcgcggagcagaagtag

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