Lachancea thermotolerans: KLTH0H05852g
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Entry
KLTH0H05852g CDS
T01117
Name
(RefSeq) DEAD-box RNA helicase PRP5
KO
K12811
ATP-dependent RNA helicase DDX46/PRP5 [EC:
5.6.2.7
]
Organism
lth
Lachancea thermotolerans
Pathway
lth03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lth00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
KLTH0H05852g
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lth03041
]
KLTH0H05852g
Enzymes [BR:
lth01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
KLTH0H05852g
Spliceosome [BR:
lth03041
]
Complex A
U2 snRNP components
U2 related factors
KLTH0H05852g
Complex B
KLTH0H05852g
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
KH_12
ResIII
KH-I_KHDC4-BBP
Motif
Other DBs
NCBI-GeneID:
8294449
NCBI-ProteinID:
XP_002556134
UniProt:
C5E2L1
LinkDB
All DBs
Position
H:complement(514352..516787)
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AA seq
811 aa
AA seq
DB search
MSTVSAEEKKRLLLERRNKWKQKKAEFDALKVRQETNKESRVESSGTLSKIENGTQKALN
RNEESSKPVGKRSSKVKKRAFEESDEEEEPAKVELFRPDEHPDVNSPLNLDAGTTVVDED
PLDLFMQRLNTDNNDKDRGILDADVLDDALSEEEAVHEIDGVEAEFMRLKKLKSKKRVKR
LNTQTQKLEPFVKDFYIEPEEIKNMSETEIDELRLGLDNVKIKGQGCPRPIVKWSQLGLT
TDIMDLITKEFAFVSPTPIQAQAIPAIMAGRDVIGISKTGSGKTVSFLLPLLRQIKALRP
LTSGETGPMGLILAPTRELAVQIHEETEKFLNPVSKLRSICCTGGSELKQQIKELKKGVE
IVVATPGRFIDLLTLNSGKLLNTERVTFVVMDEADRLFDLGFEPQITEIMKTIRPDKQCV
LFSATFPTKLKSFASRILDRPISITINSKSLINENIEQQLRIYDNDESKFEGLLDILRKQ
TQMSSDDERDEKIIVFLSSQQICDLIYYRLQEQNYTTYAIHAGKPYNERASSLEKFKNTK
NGILLCTEVLSRGLNVPEVSLVIIYNAVKTFAQYVHTTGRTARGDKHGTAVTLLLSDELA
ASYILNKSLRDTEIELLDEGTIEKLKAMANKFDSGMKTGKYRLTKGFGGKGLEHMEKLND
EKHNQELKQYNVPEQSKGSEKEDDNHPEADQVIVPKLEYVFLQNKNPNGRITYSAEVNVN
DLPQLVRWEATKNTTLSFIKHETACSITNRGRFYPEGSGPKSASDEPKLYLLIEAHEEKD
VRLAIELLEDKVKEGVKKVSINEAKSSKFSL
NT seq
2436 nt
NT seq
+upstream
nt +downstream
nt
atgagtactgtaagtgctgaagagaagaagaggctgctcttagaaaggagaaataaatgg
aagcagaaaaaggcagagtttgatgctttaaaggtgcggcaagaaactaacaaagagagt
agagttgaaagcagtgggacgctgagcaaaatagaaaatggtacgcagaaggcattgaat
cgcaacgaggaaagctcaaagcctgttggcaaaaggtcttcgaaagttaagaagcgagca
ttcgaggaaagtgacgaagaagaggagccggcgaaggtcgagcttttcagaccggatgaa
cacccggacgtcaatagccccctaaacttggatgcgggaacgaccgtcgtagatgaagat
cctctggatttgttcatgcaaaggttgaacaccgacaacaacgacaaagatcgcgggatt
ttagatgcagacgttttggacgatgccctttccgaggaagaggccgttcatgagattgat
ggtgtcgaagcagagtttatgcgcttgaaaaaacttaaatcgaagaaaagagtcaagaga
ttgaatacccagacccaaaaattagaaccattcgttaaggacttctacatagagccagag
gaaattaaaaatatgagtgaaactgaaattgatgaactgcggctcggtctagataacgtc
aaaatcaaaggtcaaggctgtcctcgccctatcgtaaaatggtcgcagttaggattaacc
acggatattatggacttaataacaaaagagtttgcctttgtatcaccgacgcccattcaa
gcacaagcaattcctgccataatggctggacgagatgtaattgggatatctaaaacaggg
tcagggaaaacggtatccttcttgcttcctttactaagacaaataaaagctctacgtccg
ttaactagcggggaaacaggacccatgggattaattcttgcacccaccagagagctagcc
gtccaaattcatgaagaaacagaaaagtttctgaatcccgtatccaaactgcgatcaatt
tgctgtacaggcggttctgaactaaaacagcaaattaaggaattgaaaaagggtgtcgag
attgttgtcgctactccaggaaggtttattgatcttttgacgctaaactcaggaaagctt
ttgaatacagagcgcgttacttttgttgtgatggatgaagcggaccgtttgttcgatctt
ggtttcgagcctcaaatcacggagatcatgaagactataaggccggataagcagtgcgtt
ctgtttagcgcaacgtttccgactaagctgaaatcttttgcatcaagaattttggacaga
cccatcagcataaccataaactcaaaaagcttgattaacgaaaacattgagcagcagttg
aggatttacgacaatgatgagagtaagtttgaaggtttactcgatattctcagaaaacaa
acccaaatgagttcagacgatgaaagagacgaaaaaatcattgtgtttctatctagtcaa
caaatttgtgacttgatttactataggttgcaggagcaaaattacacaacatatgccata
cacgctggtaaaccttacaatgagcgagcttcaagtttggagaagtttaaaaatacgaaa
aatgggattctgttgtgtaccgaggttctttctcgggggcttaacgttccagaggtttct
ctcgtcattatttacaatgctgtaaaaacctttgcacagtatgttcacactaccggtcga
actgcacgtggtgacaagcatggaactgctgttacgcttttgttgagcgacgagttggcg
gcatcctacatattgaacaaatcgctgcgcgatactgagatagaactgctcgacgaagga
actattgagaaactgaaagctatggcaaataaatttgattcgggtatgaagacaggcaag
tacagactcaccaaaggttttggaggtaaagggcttgagcacatggagaaactcaacgac
gagaaacacaaccaggagttaaagcagtataacgttcctgaacaatccaaaggatcagag
aaggaggatgacaaccatccagaggccgaccaagttatagttccaaaactagaatatgtc
tttttgcaaaacaaaaatccaaatgggcggataacttacagtgcggaagtcaacgtcaat
gatcttccgcagcttgtgagatgggaagcaaccaaaaacacaacattatcttttatcaag
catgagactgcatgcagcattacaaataggggaaggttctatccagaaggctccggccct
aaaagtgcaagtgatgaacctaagctgtatctgttaatagaagcacatgaagaaaaagat
gtgagacttgctattgaactactcgaggataaagttaaggaaggagtcaaaaaagttagc
atcaatgaagccaagagcagtaagttttcgttatag
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