Lachancea thermotolerans: KLTH0H06204g
Help
Entry
KLTH0H06204g CDS
T01117
Name
(RefSeq) KLTH0H06204p
KO
K12820
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:
5.6.2.6
]
Organism
lth
Lachancea thermotolerans
Pathway
lth03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lth00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
KLTH0H06204g
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lth03041
]
KLTH0H06204g
03009 Ribosome biogenesis [BR:
lth03009
]
KLTH0H06204g
Enzymes [BR:
lth01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
KLTH0H06204g
Spliceosome [BR:
lth03041
]
Complex A
U2 snRNP components
U2 related factors
KLTH0H06204g
Complex B
KLTH0H06204g
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
KLTH0H06204g
Ribosome biogenesis [BR:
lth03009
]
Eukaryotic type
90S particles
Helicases
KLTH0H06204g
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
DEAD
Helicase_C
HA2_N
AAA_22
AAA_19
SRP54
Flavi_DEAD
AAA_23
ResIII
nSTAND3
AAA_30
AAA_7
ABC_tran
Motif
Other DBs
NCBI-GeneID:
8294464
NCBI-ProteinID:
XP_002556149
UniProt:
C5E2M6
LinkDB
All DBs
Position
H:544108..546423
Genome browser
AA seq
771 aa
AA seq
DB search
MTSKRRHSSHSEHKSAVESSIPEHAAEVAEELSKKQRVPSKEPLTHHDAGEFHDLVRHKT
TAAQAEVLESGAKNPFTGQVFSPRYFDILKVRRDLPVHAQREEFLKIYQKNQVMVFVGET
GSGKTTQIPQFVLFDEMPHLLNTQVACTQPRRVAAMSVAQRVAEEMDVKLGEEVGYSIRF
ENKTSDKTILKYMTDGMLLREAMEDHDMKRYSCIILDEAHERTLATDILMGLLKQVVVRR
PDLKIIIMSATLDAEKFQKYFLDAPLLAVPGRTFPVELYYTPEFQRDYLDSAIRTVLQIH
ATEEPGDILLFLTGEDEIEDAVRKISLEGDQLIREQNCGPLSVYPLYGSLPPHQQQRIFE
PAPEPFNGRPGRKVVVSTNIAETSLTIDGIVYVVDPGFSKQKVYNPRIRVESLLVSPISK
ASAQQRAGRAGRTRPGKCYRLYTEEAFKKELIEQSYPEILRSNLSSTVLELKKLGVDDLV
HFDFMDPPAPETMMRALEELNYLACLDDDGNLTPLGRLASQFPLDPMLAVMLIGSPEFHC
AQEILSIVAMLSVPSVFIRPVKDKKRADDAKAIFAHPDGDHITLLNVYHAFKSDEAYEYG
INKWCRDNFLNYRALSAADNIRSQLERLMVRYNLVLNSTEYEDPRYFDNIRKALAAGFFM
QVAKKRSGGKGYITVKDDQDVLIHPSTVLGHDAEWVIYNEFVLTSKNYIRTVTSVRPEWL
IDLAPAYYDLDNFRKGDVKLSLERVKQKVDRINELNEEKSKKKKKSKKDKS
NT seq
2316 nt
NT seq
+upstream
nt +downstream
nt
atgacatccaagagacggcattcgagccatagtgagcacaagtcagctgtagaaagctct
attcccgaacatgctgcggaggtagcggaggaactcagcaaaaagcagcgtgtgccttct
aaagagcctctcacgcaccatgatgcaggcgaattccacgacttggttcgccataaaact
accgccgcgcaggctgaagttcttgagagcggggcaaaaaacccattcactggccaagtt
ttcagccctcgctactttgacatcctgaaggttaggagagatctaccggtgcatgctcag
agagaagagttcctcaaaatatatcagaaaaaccaggtaatggtctttgttggtgaaact
ggttccggtaagacaacgcagattccacagtttgtgctatttgatgaaatgcctcatttg
ttgaacacacaggtggcgtgtacccagccccgtcgtgtggctgcaatgtccgttgcacaa
agagttgcggaggaaatggatgtgaagctaggtgaagaggttggttactccattcgtttc
gaaaacaagacatccgacaagactattctcaaatacatgactgatggtatgttgctaagg
gaagctatggaagatcatgacatgaaacggtactcctgcatcatcctggatgaagcgcac
gaaaggacactggccactgacattttgatgggtcttcttaagcaagtggtggtccgtaga
ccggacctgaagattatcatcatgtctgccaccctggatgcagagaagtttcaaaagtac
ttcctagatgcgccactgctggccgtaccaggtagaaccttcccagttgaactatattat
acacccgagtttcaaagagattatttggattcagcaattcgcaccgtcctacaaatccac
gccactgaggagcccggtgatattttgttgtttttaaccggtgaagatgagattgaggat
gcggtaaggaagatatcccttgaaggcgatcagctgattcgagagcagaactgtggtcct
ttgagtgtctatcccctttacggttccttgccaccccaccaacagcagcgcattttcgag
ccggctcctgagcccttcaatggaagaccaggtagaaaggtagtggtctctaccaacatt
gctgaaacttctttaactattgacggtattgtttacgtggttgatcctggtttctctaag
caaaaggtgtacaacccaagaattagagttgagtctctgttagtttctccaatttctaaa
gcctctgctcaacagagagcaggtcgtgcaggtcgtactagacctggtaagtgttacaga
ctgtacaccgaagaagcgtttaagaaggaattaatcgagcaaagctatccggaaattcta
cgttctaacttgtcctccaccgttcttgagctaaagaagcttggcgtcgatgacttggta
catttcgactttatggaccctcccgcgcctgaaacgatgatgagagcactggaggaattg
aactaccttgcttgtcttgatgacgacggtaacttgaccccactgggaagattggcctct
cagttcccgctggacccaatgcttgctgtcatgctgattgggtcccccgaattccactgc
gcacaggaaatattgagtattgtggctatgctctcggttcccagcgtattcatccgtccc
gtcaaggacaagaagagggctgatgacgcaaaggctattttcgctcatccagatggggac
cacataacgctcttaaacgtttaccacgcgttcaagtctgatgaagcgtacgagtacggc
atcaacaagtggtgccgcgacaactttttaaactacagagcattatctgcagccgataac
attcgctcacagttggagaggctgatggtgcgttacaacctggtactgaattctacagaa
tatgaagatcctcgctattttgacaacattcgcaaggccttggcagccggtttcttcatg
caggttgcaaagaagagatcaggtggtaaaggctacatcacggttaaagacgatcaagac
gtgctgatccaccctagcaccgttctgggacacgacgcggaatgggttatatataacgaa
tttgtcctgacttccaagaactacatccgtacagtcacatcagtcaggcccgaatggttg
attgacttagcgcctgcgtactacgacttagacaatttcaggaagggtgacgtcaaactc
tcacttgaacgcgtgaaacaaaaagttgaccgcatcaacgagttgaatgaagaaaagtca
aagaagaagaagaagagcaagaaggataagagttag
DBGET
integrated database retrieval system
