Lachancea thermotolerans: KLTH0H08008g
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Entry
KLTH0H08008g CDS
T01117
Name
(RefSeq) Sm-like protein LSM2
KO
K12621
U6 snRNA-associated Sm-like protein LSm2
Organism
lth
Lachancea thermotolerans
Pathway
lth03018
RNA degradation
lth03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lth00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
KLTH0H08008g
09123 Folding, sorting and degradation
03018 RNA degradation
KLTH0H08008g
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lth03019
]
KLTH0H08008g
03041 Spliceosome [BR:
lth03041
]
KLTH0H08008g
Messenger RNA biogenesis [BR:
lth03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
KLTH0H08008g
mRNA degradation factors
5'-3' decay
Lsm complex
KLTH0H08008g
Spliceosome [BR:
lth03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
KLTH0H08008g
Complex C
U2 snRNP components
KLTH0H08008g
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Hfq
Gemin7
Motif
Other DBs
NCBI-GeneID:
8294546
NCBI-ProteinID:
XP_002556228
UniProt:
C5E2V5
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All DBs
Position
H:join(703423..703476,703553..703786)
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AA seq
95 aa
AA seq
DB search
MLFFSFFKTLVDQEVTVELKNDIELKGTLKSVDQFLNLKLDNISCSNESKYPHLSSVRNI
FIRGSTVRYVYLNKNMVDTNLLQDAARREAMSARK
NT seq
288 nt
NT seq
+upstream
nt +downstream
nt
atgctgttcttctcctttttcaagactctggtggaccaggaggtcactgtggagctaaag
aatgacatagagctgaaaggaaccctgaagtcggtagatcagttcctcaacctcaagctt
gacaatatatcgtgctcgaacgagagcaagtacccccacctgtcgtcggtaagaaacatt
ttcatcagagggtcgacagtaaggtacgtgtatctcaacaagaacatggtcgacaccaac
ctgctgcaggacgccgctagaagggaggcgatgagcgccagaaagtaa
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