Lachancea thermotolerans: KLTH0H08646g
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Entry
KLTH0H08646g CDS
T01117
Name
(RefSeq) RNA-dependent ATPase ROK1
KO
K14779
ATP-dependent RNA helicase DDX52/ROK1 [EC:
5.6.2.7
]
Organism
lth
Lachancea thermotolerans
Brite
KEGG Orthology (KO) [BR:
lth00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lth03009
]
KLTH0H08646g
Enzymes [BR:
lth01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
KLTH0H08646g
Ribosome biogenesis [BR:
lth03009
]
Eukaryotic type
90S particles
Helicases
KLTH0H08646g
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Utp25_C
Motif
Other DBs
NCBI-GeneID:
8294574
NCBI-ProteinID:
XP_002556250
UniProt:
C5E2X7
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Position
H:750413..752113
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AA seq
566 aa
AA seq
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MDIFQVLTRGANVKKNGKLGASGDFSKSNGSQRKQIQAGSTRKEDDNKQLTKELDFFRNK
KVVSKTENAQAGKHDPAEDIAAEVSTLGDEMPPPKISSAHDAVLLRKSYKGNVTGQDLPL
PIGSFEDLITRFQFDKRLLSNLIESHFTEPTPIQCEAIPLALEGRDVLACAPTGSGKTVA
FILPLLQQIISLGDKEGLKGLIISPTKELANQIFVECSKLSHKIYLARKRPLNIALLSKS
LSAKLRNKVISDKKYDLIISTPLRLIDVVKNEALDLSDVKHLIFDEADKLFDSTFVEQAD
SILASCQDSQLRKSMFSATVPSSLEEVVNSIMLDPVRIIIGHKEAANVNIEQKLVYCGNE
EGKLVAIRQMIQEGGFKPPVIIFLESITRAKALFHELLYDNLNVDVIHAERTQVQRNTII
ERFRTGELWCLICTDVLARGVDFKGVNLVINYDVPRSAQAYVHRIGRTGRGGREGKAVTF
YTKQDDMAIKPIINVMRQSGFEIAEWMEKFAKMTKREKEALKKGKSRPERKQISTVPNVV
KKKRRQREQMVEASKKRKEQDDEERS
NT seq
1701 nt
NT seq
+upstream
nt +downstream
nt
atggatatcttccaggtactcacgaggggagccaacgtaaaaaagaatgggaaattaggg
gcgtcaggcgactttagcaagtcaaatgggtctcaacgtaaacagatccaggcgggaagt
acccggaaagaggatgacaacaagcaactcaccaaggagcttgatttcttcagaaacaag
aaagtggtgagcaagacagaaaacgcgcaagctgggaaacacgatcctgcggaggacatt
gcggctgaggtgagcactttgggagacgagatgccaccgcccaaaatctcgagtgctcac
gatgcggtcctgctgcgaaagtcgtataaagggaatgttacaggccaagatctcccactg
ccgattggttcgtttgaggatttgataacacgtttccaatttgataagcgattactgtcg
aacttgattgaaagccactttacagaacctacgccaattcaatgcgaggctattcctcta
gctcttgaagggcgtgacgttttggcgtgtgcgcctacgggttctggtaaaactgtggcc
ttcatattgccacttttgcagcaaataatatccctgggggacaaagagggcctcaaaggc
ctgataatatcgcccacgaaagagctggctaaccagatttttgtggagtgcagcaagctt
agccacaaaatctacttagccagaaagaggccccttaatattgcccttctaagcaaatcc
ttgagtgcaaagctcagaaacaaagttatcagcgacaaaaaatacgacttaataatttcc
acaccgctgaggttgatagatgttgttaagaacgaagcactagacctttcagatgttaag
catctgatatttgacgaagctgataagctgtttgacagcaccttcgtggagcaagccgat
agcattcttgcatcttgccaagattctcagctcagaaagtctatgttttctgcgacagtt
ccttccagtttggaggaagtcgtcaatagcattatgctggatccagtaaggattataatt
ggccataaagaagccgctaatgtcaacatcgagcagaagctggtttattgtggtaatgaa
gaaggaaagctggtcgcgattaggcagatgatacaggagggtgggttcaagcctccggtg
attattttccttgagtctatcaccagagctaaagctttattccatgaactgctctacgac
aatctaaatgtcgacgttatccacgcagaaagaactcaagttcagagaaacacaatcatt
gagcgctttaggacaggcgagctgtggtgtttgatctgtaccgacgtgttggctcgtggt
gttgacttcaagggcgttaacctagttataaactacgacgtgccaaggtcagcacaggct
tatgtccacaggattggtaggaccggaagaggtggccgtgaaggtaaagctgtgacattt
tacaccaagcaggatgacatggctatcaaacccataattaacgtcatgcgtcaaagcggt
tttgaaatcgctgagtggatggagaaatttgcaaagatgaccaagagagagaaggaagct
ctaaagaagggaaagtcgcggccagaaaggaagcagattagcacagtacccaacgtggtc
aagaaaaagagaagacaaagagagcaaatggtggaggcctcgaaaaaacgcaaggagcag
gacgacgaggagcgctcttga
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