Lachancea thermotolerans: KLTH0H14256g
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Entry
KLTH0H14256g CDS
T01117
Name
(RefSeq) KLTH0H14256p
KO
K24155
rabconnectin-3a
Organism
lth
Lachancea thermotolerans
Pathway
lth04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
lth00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
KLTH0H14256g
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lth04131
]
KLTH0H14256g
Membrane trafficking [BR:
lth04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
KLTH0H14256g
Endosome - Lysosome transport
Acidification regulators
Rabconnectin-3 complex
KLTH0H14256g
RAVE complex
KLTH0H14256g
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rav1p_C
WD40_CDC20-Fz
Beta-prop_ELP1_1st
BPTI_nem
Motif
Other DBs
NCBI-GeneID:
8294837
NCBI-ProteinID:
XP_002556475
UniProt:
C5E3K2
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Position
H:complement(1238169..1241963)
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AA seq
1264 aa
AA seq
DB search
MSLNFLPGQPNDTIQTVCQSSWQEHTLMAYCSGNNLIILSNNFSKLQTIYLESDCIAVDI
DASNGHIAVAFGSAVYVYKPLHQVMRNPRWVFCTKIFHDDSKVNTISWGSNGELAVGSNY
LSFWKIREEFGNFTPCLLWTKKQFKPVYRCAVSEDSQVIASMHKYSNTVRLWKRISIGGD
RDLFDLTLISHPAPVTTFRWKRTNNFCEEERDSHVLYTLCSDYKLRIWVYFEVNGRKTVQ
QWGSLELDEAKNQRFFFILDSWLVQEVLSGHTPPEFEYFSRLHPEVAIIADSSGRLDVYA
LENLSHDPPKLMSKRKLCSTQIDPGAFVHLPEFLYFAEPQLTRGDSKQISLIVHDVKGVL
RHSSVDLTKALTGKSGKFGTLLHKLTGHNKSIQKLGRSSDGMAMITLSRFSENCIWVPQP
LPGCMSLRKKNIIYSETPLLDAVVLERGALVVTLSMNLELQIWDCPDSKSSKKSIARSTH
ILDKIMGEPRLMLNTPEKKHQHDCHFIALIYSSGQTCGFEVSFSRGIVPVKSSSLDIGDE
KDIYLVSSINPVNYGFFADRSLVSIITKNGLIKTFKSIVMPHFIEWKLTFEMDTGLSDCT
LICGSSIDKICVVDKSRQRLTIWDLRRSFLEYEESFDDLIRDIDWTSTKFSQSIFSVGFK
DHSLLFTQLRYDYTSKNPSYCPVEKIDLSQHTTHPVGDSIWMTDGTFVAASGNQLFIKDK
YLDIHDKFTNQSIGSRRILSNDIMHLSTVLNGPLPVYHPQMLIQALYAGKLKLVREILLR
LFLKLRDFEFRSIDVAELGSTLELSYQKFVCPNEESYSMDSYPEPYSYFNASVSLSLKEK
LAKHALPFLTRHQQVTLLTVIEAIEDMDKNDRALDYNGMLFILGVKLFELHRKTQESVHV
RDALWSLCSKNRKVLFSTVMPNINSWKRAREYKISYWAERDDLVATFDNIAKFEFSNDAN
RDPRSAGIFYLSLKKKQILTSLWRISVGHPEQQKMLKFLNNDFREPRWRRAAFKNAFVLL
SKHRFPDAACFFLLADSLKDAVNVILKQMDDLPLAFGVCRVYEGDFGPVLKDVLLNNVLP
QAVLSNDRWLTSLIYHAINEPSLAMKALIMSPIHLSDNAKLINQQESVNKSFLVEDPALL
MLYRQVRRMGRTLYAASLEVDTELEYKTVLRVAAIYTRMGCDFLALSLIVNWKFEDKFLR
EKQNIEVKTTPEKSPANNDEQPVRLRSIFEKFDDISGKPVQQGINSTGGASGNNTQVRSL
LDDF
NT seq
3795 nt
NT seq
+upstream
nt +downstream
nt
atgtcgctcaactttttgccaggacagccaaatgacactatacaaacggtgtgtcagagt
tcatggcaggagcacacgctcatggcctactgctcgggcaacaacttgatcattctctct
aacaatttcagcaaacttcaaacgatttacctggaaagtgattgtatagctgttgacatc
gacgcatctaatgggcatattgctgtggcatttggctcggcagtctatgtttacaaacca
ctgcaccaggtgatgaggaatccccggtgggtattctgcaccaagatctttcatgatgat
tcaaaagtcaacacgattagctggggaagcaacggcgagctagcggttggctccaattac
ttgtctttttggaaaatacgggaggagtttggtaattttactccatgtttgctctggact
aagaaacagttcaagcctgtataccgatgcgcagtgtccgaggattcgcaggtgattgct
agtatgcacaagtatagtaacactgttcggctttggaagcgcatttcaatcggcggtgat
cgagatcttttcgacctcacgcttatttcgcatcctgccccagtaactacctttagatgg
aagcgcactaacaacttttgtgaggaggaaagagactcgcatgtgctgtacactttgtgc
tccgactacaagctgcgaatatgggtttattttgaggtaaacggtagaaagaccgttcaa
caatggggaagtttggagctggatgaggcgaaaaaccagcggtttttctttattttggac
agctggcttgttcaagaggtactatcaggccatacacccccagaatttgagtatttttct
cggctgcaccccgaagttgccattatagcagactcctcaggaagacttgatgtttatgcc
ctggaaaacctctctcatgaccctccaaagcttatgagtaaaagaaagctttgctctact
caaatcgatcctggtgcctttgttcacttaccggagtttctgtattttgctgaacctcag
ctcacgcgaggcgactcaaaacagatttcactcattgttcatgacgtcaaaggtgtcctg
cgacattcaagcgttgacctgactaaggcattgactgggaaaagcgggaaatttggtacc
cttttgcacaagttaaccggtcacaacaagtcgatccaaaagttaggaagaagcagcgat
ggtatggccatgataactttatcacgcttctccgaaaattgcatatgggttccgcagcct
ctacctggatgcatgtctcttcgtaaaaaaaacatcatctacagtgaaacacctttactt
gatgcagttgttctcgagcgcggcgcattggttgtaacactttccatgaatctcgagctt
caaatatgggattgccctgacagcaaaagcagtaagaagtctattgctagatcgacacac
attctcgacaagataatgggcgagccccgcttaatgcttaataccccagaaaaaaagcat
caacacgattgccatttcatcgccttgatctactcaagtggccaaacatgcggattcgaa
gtctcattcagccgtggcattgtcccagtaaaatccagctcgctcgacattggggatgaa
aaagatatatacctggtgtcctccatcaaccctgtgaattatgggtttttcgctgatagg
tctttggtctccattattaccaaaaacggcctgattaaaacattcaaaagcatagtcatg
cctcatttcatcgagtggaagttgacgttcgaaatggacacaggtctttctgactgtacc
ctaatatgtggctcttcaatagacaaaatatgtgtggttgataaatctcgccagagatta
acaatttgggatttaaggagaagttttctagagtatgaagagtcatttgacgatcttata
agagatattgactggacgagcacaaagttcagtcagagtattttttctgttggattcaaa
gatcattctctattgttcacccaacttaggtatgactacacaagcaagaatcccagctac
tgtcccgttgaaaaaattgacctaagtcaacacacaactcatcccgttggagattcaatc
tggatgacagacggaacatttgttgctgcctctggaaaccaattatttatcaaggacaaa
tatttggacatccatgataagtttacaaatcagtccataggatcaagaaggattctttca
aacgatatcatgcacttgagcacagtcctgaacggccctcttccagtctatcacccacaa
atgctgattcaggcattatacgcaggaaagttgaagctagtaagagaaatccttttgaga
cttttcttgaaacttcgagattttgagttcagatctattgatgttgcagaattaggttca
acattggagcttagttatcaaaagtttgtctgtccgaacgaggagtcctactcaatggat
tcttaccctgagccgtattcatacttcaatgcctcggtatcactttcattgaaagaaaaa
ctcgccaaacacgccttaccattccttactcgccatcaacaagtaacactgttgacagta
attgaagctattgaagacatggataaaaacgaccgggcgcttgattacaacggcatgctt
tttatacttggggtcaaacttttcgagttgcaccgcaaaacgcaggaatcagtccatgtc
agagatgctctttggtctctatgttcaaaaaatcgtaaggtcttgttttcaacggtgatg
cccaacatcaattcttggaagcgcgcacgggaatacaaaatcagctactgggcagaacgc
gacgacctcgtggctacattcgataatatcgcaaaatttgagttttcaaacgatgcaaat
agagatccaagaagtgccggtattttctatctatcattgaagaaaaagcaaatccttact
agcttgtggagaatcagcgtaggtcatccggaacaacaaaaaatgcttaaatttttgaat
aacgattttcgagagcctcggtggagaagggcggccttcaaaaatgcttttgtattactc
agtaagcaccgtttcccagatgcggcgtgtttttttttgctggcagactcgcttaaggac
gccgttaatgtcattctcaaacaaatggatgacctcccactagcttttggcgtttgtagg
gtttacgaaggtgattttggcccggtgctaaaggatgttttattaaacaatgttttgccg
caagcggttttgagcaacgaccggtggttgactagcttgatctaccatgctatcaacgag
cctagtctcgccatgaaggctttaattatgtcccccattcatctgagcgacaacgcaaag
ctgataaatcagcaagaatcagtcaacaagtcctttttggttgaagatcctgccctcctc
atgctttatagacaggtcaggagaatgggtaggactctctatgctgcatctttagaggtc
gatacagagcttgagtataaaactgtgctcagagtcgcagcgatctacacgagaatgggc
tgtgactttttggcgctttcgcttatagtgaattggaaatttgaagataagttcctgcgc
gagaaacaaaacattgaagttaagacaacgcctgaaaaatcgccagctaataatgatgag
caacctgtgagattgagaagcatatttgagaaattcgatgatatatcgggtaaacctgtc
caacagggcatcaactccacaggtggtgctagcggtaataacacccaggtcagaagcttg
ctggatgacttctag
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