Lactococcus taiwanensis: JW886_01080
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Entry
JW886_01080 CDS
T07214
Symbol
addA
Name
(GenBank) helicase-exonuclease AddAB subunit AddA
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
lti
Lactococcus taiwanensis
Brite
KEGG Orthology (KO) [BR:
lti00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lti03400
]
JW886_01080 (addA)
Enzymes [BR:
lti01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
JW886_01080 (addA)
DNA repair and recombination proteins [BR:
lti03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
JW886_01080 (addA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_12
DEAD
PDDEXK_1
AAA_30
ResIII
KdpD
AAA_7
AAA_16
AAA_22
Motif
Other DBs
NCBI-ProteinID:
QSE76899
UniProt:
A0AA45KGM1
LinkDB
All DBs
Position
212639..216244
Genome browser
AA seq
1201 aa
AA seq
DB search
MSEIQLTPEQFEAIHSSGKNILVSASAGSGKTFVMAQRIVEKVKQGVEIDHLFISTFTKK
AASELRMRLEKDLKKARAESKDVHYQRLTGALQNLANADIGTMDSFTQKLVKTHFNRVNI
DPNFRILADQTESDLIKQEVFERLVEEYLAADHEQDIPKEKFERLIKNFSKDRNISGFQE
VVYKVYRFITATENPTKWLEDQFLKGFETYQQLTDLSVDTHGLIKEKLLSFFELLEAALD
NGVIAKKGVGRDKANIILDNKNELLEALINQEFTTFSELFLTLDTDIRVGTSKDANISVL
KKEFSALKQELVGSNSKPGLIREFVNKIKHAELIQRYQPEAFDVAKDLQRFMLHFYQAYL
ERKKIENAFEYSDIAHFAIEILENNPDIREELRLYYEEIMIDEYQDTSHTQERMLELLSN
GQNLFMVGDIKQSIYGFRLADPSLFLEKYQSYDQENDPNQLIRLKENFRSRGEVLNFTNV
IFEHLMDQDIGEMTYGQAEKLIQGNTTDYPTQAEQEFYPELLLYNETKEDESTEENGENL
SDGEIRGAAQKIQHLIQKGVQPKDIAILVRSKSNNNKIEDILLSYDIPVVLDEGRVDFLK
SIEVLVMLDVLRAIDNPLYDLSLVATLRSPLFNFNEDELTKISLQGGREVRFWDKLKQAL
TLTGQNPELIDGAFSKKLKSFYDKFTEWRKLVNQISIHELLWRIYTETYYFDYVGALKNG
EMRQANLQALSIRAESYESSGYKGLFKFIRLIDKFMEQNNDLASVNIKLPQNAVRVMTFH
KSKGLEFDYVFLMNLQSRFNSRSLQESVILSRENGLGMKYVADLKKEPEVVTDFPYALVR
METFPYMVNQELEQKATLSEEMRVLYVAFTRAKKKLYLVGKIKSTDKKSGLDLYDTAVLE
QNILSDKFRKSTRGFQHWILALQAAINLPLKMNIYTKDDIASPSSNLLGHPDFKKLVEEA
TNFDQIMSFSEEIKAAQKIMTYQYPHQAATELSSIQTPSQVKKRSYEKQLAVGEVQPSSE
FIRSKRLDFSAFDEHQVTAAQIGSATHTFMQYVDFSHPDLFSFQSTLDEMGFVEEIKNQI
DLVKILTLFDTELGKFLTENVANTKKEAPFSMLRTDEYAEEQYIVRGICDGFVQLEDRIV
LFDYKTDRFTTAQAIPEIKNRYQGQMELYGEALQKAYQVKEVDKYLILLGGPKQVFVEKL
D
NT seq
3606 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaaatacagttaacaccagagcagtttgaagctatccatagctctggtaaaaat
attttagtttcagcaagtgctggttcagggaagactttcgtgatggctcagcgtattgtt
gagaaagtcaaacaaggggttgaaatcgaccatctttttatctcgaccttcacaaaaaaa
gctgcgagcgaattacgcatgcgtctagaaaaggatttgaaaaaagcgcgagcagaaagt
aaggatgtgcactatcaaaggttgacaggagctttacaaaatcttgctaatgcagatatt
ggaacaatggatagtttcacccaaaaacttgtaaagactcattttaatcgagtaaacatt
gatcctaattttcgtattcttgctgatcaaacggagagcgatttaatcaaacaggaagtt
tttgagcgtctggtagaagagtaccttgcagcagatcacgaacaagacattcccaaagaa
aaatttgagcgtttgatcaaaaatttttccaaagatcgaaatatttcgggatttcaagaa
gtcgtttacaaggtttacaggtttataaccgccacagaaaaccccacaaaatggttagaa
gatcagtttttaaaaggttttgagacatatcagcagctgacagatctatcagtagatact
catggactcataaaagaaaagttattatctttttttgaacttttagaagcagcattggat
aatggagtgatagccaaaaaaggggttggtcgtgataaagcgaacattatcttagataat
aaaaacgaactcttagaagctttaatcaatcaggagtttacgactttttctgagcttttt
ctgaccttggatactgacattcgagttggtacttcaaaagatgcaaatatttcggtcttg
aaaaaagagttttctgcacttaaacaagagttggtaggttcaaatagtaaaccggggctg
attagagagttcgtcaataaaatcaaacatgcggaacttatacaaaggtatcaacctgaa
gcttttgatgtagcgaaagatttacagcgcttcatgcttcatttttatcaagcatatctt
gaacgtaaaaagattgaaaatgcttttgaatactctgatattgcgcattttgctatagaa
atactggaaaataatccggatattcgtgaggaactgcgtctttattatgaggaaatcatg
attgatgagtaccaagataccagtcatacgcaagagcgaatgttggagcttctctcaaac
ggacaaaatctttttatggtgggtgatattaagcaatccatttatggattccgcttagct
gatccaagtttatttttagagaagtatcaaagttatgatcaggaaaacgaccctaatcaa
ctgattcgcttgaaagagaattttcgttctcgtggtgaggtgctcaactttacgaatgtt
atttttgagcatttgatggatcaggatattggtgaaatgacctatggtcaagctgaaaag
ctaatccaaggaaataccacagattaccctactcaagcagagcaagaattttatccagag
ctcttgttatacaatgagactaaagaagacgagtctactgaggagaatggggaaaatctt
tctgatggagaaatcagaggagcagctcaaaagatacagcatttgattcaaaaaggggtt
caacccaaagatattgcgatattggtacgctcaaaatcaaataataataaaattgaggat
atacttttaagttatgacatccccgtagttttagacgaaggtcgtgtggattttctaaaa
tcaattgaggttttagtcatgctagatgtcttacgcgccattgacaatcctctatatgat
ttatctctcgtggccaccctgcgttctcctctttttaatttcaatgaagatgaattgaca
aagattagcctgcaggggggaagagaagttcgcttttgggataagttaaagcaagcactt
actctaacagggcaaaatcctgaattaatcgacggagccttctccaaaaagctgaagtcc
ttctatgataagtttacagaatggcgtaaacttgtcaaccaaatttcaattcacgaactc
ctttggcgaatatatacagaaacctactatttcgactatgtgggagccttaaaaaatggt
gaaatgcgacaggcaaaccttcaagctctatcaataagggctgaatcttacgaaagcagt
ggctataaaggactctttaaattcatcagattgattgataagtttatggaacaaaataat
gacttggcttctgtaaatataaaattacctcaaaatgcggtacgtgtgatgacttttcat
aagtccaaaggattagagtttgactatgtttttctgatgaatcttcagtcgcgctttaat
agtcgttcgctgcaagaaagtgtaattttaagtcgagaaaatgggttgggcatgaaatac
gtggcagatttgaaaaaagagccagaagtcgtcactgatttcccatatgctctcgttcgg
atggaaactttcccttacatggtaaatcaagagcttgaacagaaggcgacactttctgag
gaaatgcgcgtgctctatgttgccttcacaagagcaaagaagaaattgtatttagtcgga
aaaataaagtctacggataaaaaatcagggcttgatctttacgatacagctgtactagaa
cagaatattctctccgataaattccggaagtcaacacgtggtttccaacactggatactt
gctctgcaagcagcaataaacctcccgctgaaaatgaatatttatacaaaagatgatatt
gcctcgccatcttcaaatcttttaggccatcctgattttaaaaaattggtagaagaagca
acgaattttgatcaaatcatgtcattttcggaagagataaaagcagcccaaaaaattatg
acttaccagtatccacatcaggcagcgacagagttgtctagtatacagactcctagtcaa
gtcaaaaaaaggagttatgaaaagcagctagcagttggagaggtacaaccgagtagtgaa
tttatccgatctaagcgtctcgacttcagcgcctttgatgagcatcaagtgacagctgct
cagattggttcggcaacacatactttcatgcaatatgttgacttttcacatcccgattta
tttagttttcaaagcactttagacgagatgggatttgttgaggagataaaaaatcagatt
gatttagtcaaaattttgacgttatttgatactgaacttgggaaatttttaactgagaat
gtcgcaaatacaaaaaaggaagcaccattttcgatgttaaggacggatgaatacgctgaa
gagcaatatattgttcgaggaatttgtgatggttttgtgcagctggaggatcggattgtt
ctttttgattataaaacagatcgctttacaactgctcaggctatcccagaaataaaaaat
cgttaccaaggtcaaatggaactttatggagaagctctgcaaaaagcttaccaagtcaag
gaagttgacaaatatttaatattactaggcggaccaaagcaagtatttgtggaaaaattg
gactga
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