Lactococcus taiwanensis: JW886_05880
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Entry
JW886_05880 CDS
T07214
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
lti
Lactococcus taiwanensis
Brite
KEGG Orthology (KO) [BR:
lti00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lti03032
]
JW886_05880 (topA)
03400 DNA repair and recombination proteins [BR:
lti03400
]
JW886_05880 (topA)
Enzymes [BR:
lti01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
JW886_05880 (topA)
DNA replication proteins [BR:
lti03032
]
Prokaryotic type
DNA Topoisomerases
JW886_05880 (topA)
DNA repair and recombination proteins [BR:
lti03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
JW886_05880 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
DUF2996
DUF5091
C1_2
Motif
Other DBs
NCBI-ProteinID:
QSE76005
UniProt:
A0AA45QQR9
LinkDB
All DBs
Position
1187750..1189870
Genome browser
AA seq
706 aa
AA seq
DB search
MPTATKTKTKKKTTRKKVTPGKNLVIVESPAKAKTIEKYLGRNYKVVASVGHIRDLKKST
MSVDIENNYEPQYINIRGKAPLINSLKKEAKAAKAVYLASDPDREGEAISWHLAHILNLP
LEEKNRVVFNEITKDAVKNAFKEPRKIDVDLVDAQQARRVLDRLVGYSISPILWKKVKKG
LSAGRVQSIALKLIVDRENEINAFIPEEYWSIDGEFKKGTKKFKASFWGIDGKKHPLKNN
DDVVQIMERLDGPDFNVDKVEKKERRRNAPLPYTTSSMQQDAANKINFRTRKTMMVAQQL
YEGLTLGSQGHQGLITYMRTDSTRISPVAQAAAHNYVVDRFGEKYSKHGSKIKNAAGAQD
AHEAIRPSNVFNTPESIAKYLDKDQLKLYTLIWNRFVASQMVAAVFDTVKVNLSQNGVIF
VANGSQVKFDGYLAIYNDSDKSKMLPEMSENDTVKKTSVKPEQHFTQPPARYSEATLIKT
LEENGVGRPSTYAPTLETIQKRYYVRLVAKRFEPTELGEIVNKLIVEFFPNIVNTEFTAE
MEKDLDEVEEGKRQWIEVVDQFYKPFAKELENAESGMEKIQIKDEPAGFDCDVCGSPMVI
KLGRFGKFYACSNFPDCRNTKAIVKEIGVKCPLCHEGNIIERKTKKNRVFYGCDRYPDCE
FTSWDKPIGRECPKSGDFLVEKKVRGGGKQVVCSNEKCDYQEEKQK
NT seq
2121 nt
NT seq
+upstream
nt +downstream
nt
atgccaacagcgactaaaacaaaaacaaagaaaaaaacaacaagaaaaaaagtaacccca
ggcaaaaatttagttattgtagaatcacctgcaaaagctaaaacaattgaaaagtattta
ggacgtaattacaaagttgtggccagtgtaggacatatcagagatttgaaaaaatctacg
atgtccgttgacatcgaaaataactatgaaccccagtatatcaacatccgcggaaaagct
cctttaattaattcgctaaaaaaagaagctaaagctgcgaaagcagtttatcttgcaagt
gacccggaccgtgaaggagaagcaatttcatggcacttagcacatattttaaatcttcca
cttgaagagaaaaatcgtgtagtttttaatgaaattacaaaagatgcagttaaaaatgct
tttaaagaaccgcgtaaaattgatgttgatttagttgatgcacagcaagcacgccgtgtg
ctagaccgtttggtcggttattcaattagccctatcctttggaaaaaagttaaaaaaggc
ctatctgctggtcgtgtacaatctattgccttaaaactaatagtagatagagaaaatgaa
attaacgcttttattccagaagagtattggtcaatcgatggtgaattcaaaaagggaaca
aagaaatttaaagcttctttttggggaattgatggtaaaaagcatcctttaaaaaacaat
gatgacgttgtccaaataatggaacgacttgatggtcctgactttaatgttgataaagtt
gaaaaaaaggaacgtcgtagaaatgctccacttccatataccacgagttccatgcaacaa
gatgctgctaataaaattaatttccgaactcgtaaaactatgatggttgcccaacaactt
tatgaaggtctaactcttggaagtcaaggacaccaagggctaattacctatatgaggaca
gattcaacgcgtatttcacccgttgctcaagcagctgctcataactatgttgttgataga
ttcggagaaaaatacagtaaacatggttcaaaaattaaaaacgctgctggcgcacaggat
gcccatgaggctatacgaccatcaaatgtatttaatactccagaatcaattgccaaatat
ctagataaagatcaattgaagctctatacgcttatttggaatcgctttgtagccagtcaa
atggttgcagctgtttttgacacagtaaaagttaatctctcacaaaacggagtcattttt
gtagctaatggttcccaagtaaaattcgatggttaccttgcaatatacaacgactctgac
aaatcaaaaatgttgcctgaaatgtcagagaacgataccgtgaaaaaaacaagcgttaaa
cctgaacagcactttacccaacccccagcgcgctattccgaagcaacgcttatcaaaact
ttggaagaaaatggggtagggcgcccctccacatatgccccaacgctagagacaattcaa
aaacgctattacgtgcgcttagtcgctaagcgttttgaacctacagagcttggagaaatt
gtcaataagcttattgttgagttcttccctaatattgtaaatactgaatttacagccgaa
atggaaaaagacttagacgaagttgaagagggaaaacggcaatggatagaggtagttgac
caattttataaaccttttgctaaagaattagaaaatgctgaatccggcatggaaaaaatt
cagatcaaggatgaaccagctggttttgattgtgacgtttgcggaagtccgatggttatc
aaacttggacgttttggtaaattttatgcatgcagtaactttcctgactgtcgaaacaca
aaggctattgtgaaagaaataggagttaaatgtccactttgtcatgagggaaatatcatt
gaacgtaagacaaagaaaaaccgtgtattttatggatgtgatcgttacccagactgtgaa
tttactagttgggacaaaccaattggacgtgagtgccctaaatctggagatttcttagta
gagaaaaaagtccgtggtggaggtaaacaagttgtttgttcaaatgagaagtgcgattac
caagaagaaaaacaaaaatag
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