Lactococcus taiwanensis: JW886_08495
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Entry
JW886_08495 CDS
T07214
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
lti
Lactococcus taiwanensis
Pathway
lti03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lti00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
JW886_08495 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lti03019
]
JW886_08495 (recQ)
03400 DNA repair and recombination proteins [BR:
lti03400
]
JW886_08495 (recQ)
Enzymes [BR:
lti01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
JW886_08495 (recQ)
Messenger RNA biogenesis [BR:
lti03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
JW886_08495 (recQ)
DNA repair and recombination proteins [BR:
lti03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
JW886_08495 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
Helicase_Sgs1
zf-CXXC
Motif
Other DBs
NCBI-ProteinID:
QSE76489
UniProt:
A0AA45KFU6
LinkDB
All DBs
Position
1722323..1724104
Genome browser
AA seq
593 aa
AA seq
DB search
MNLEVKLKEVFGYEKFRAGQKQIIEQVLSNHDTLGILPTGAGKSICYQLPAVIQSGITLV
ISPLISLMKDQVDQLNITGIPATFINSTLNEQESKERMQQVLQGHIKILFVAPERFELET
FNHFVKSLPLDLIAIDEAHCISQWGHDFRPSYLTFAHHLRSLPTQPTVLALTATATPQVT
SDIQTLLSISANHTVKTGFLRENLHFEVVKGIEKRSFLKKYLHAQEALSAGIIYASTRKE
VDEVYTWLNNQNFPAVRYHAGLSESERQHNQEQFLFDEIPLMVATNAFGMGINKPNVRFV
IHYGMPATIESYYQEAGRAGRDGLEADAILLYSPNDLRIRNFLIEQGDGDEQHKEQAYEK
LRQMQAYTHSETCLQRYILQYFGDEGENCGKCTNCLDDREQLDITVDAQKVLSCVIRMGE
RFGKTMVAQVLVGSKNKNLTKWNFEQLSTFGIMKQHSQKNVGELIDFLVAEGYLQVTPGK
FPLLFVSTEGHQVLRGHLNVFRRAPFVTVAQNETGDNFNSKLFDHLRTLRLEVAKDEGVP
PFMIFSDSSLKDMAEKSPQDETSFLSISGVGPIKLKKYGQEFIQVIQNFNNKK
NT seq
1782 nt
NT seq
+upstream
nt +downstream
nt
atgaatttagaagtaaaattaaaagaagtctttggctatgaaaaatttcgtgctggtcaa
aaacaaattattgaacaagtcctatcgaaccacgacactttaggcattctccccactgga
gctggcaagtctatctgttatcaacttccagctgtaattcaatctggaataacgcttgtg
atctctccgctgattagcctaatgaaagatcaggtggaccaactcaatatcacgggtatt
ccagcgacgtttattaactctacactcaacgaacaagaaagcaaagaacgcatgcaacaa
gttctccagggtcacatcaagattctctttgttgccccggaacgttttgaacttgaaaca
tttaatcactttgtaaaaagtcttccccttgacctgattgccatcgatgaggctcattgt
atctcgcagtgggggcatgattttcgtcccagttatctcacttttgctcaccatctaagg
agtctgcccactcagcccactgtgctagctttaacagcaacggctacacctcaagtaaca
agcgatatccaaacgctattatcaatttctgctaaccacaccgtcaaaacaggatttctc
agagaaaatcttcattttgaagtagtcaagggaatagaaaaacggtcttttttaaaaaaa
tatcttcacgcgcaggaagctttgagtgctggtattatctatgccagcacacgcaaagaa
gtagatgaagtttacacttggctcaacaaccaaaattttcctgctgtacgttatcatgca
ggccttagtgaaagcgaacgtcaacataaccaagagcaatttctgtttgatgaaattcca
ctgatggttgcgactaatgcttttggaatggggataaataaaccaaatgttcggtttgtt
atccattatggtatgcctgctacgattgaaagttactatcaagaagctgggcgggcaggg
cgtgatggtttggaagccgacgctatcctcctctactctcctaatgatttaaggatccgt
aacttcttgattgagcagggtgatggggatgaacaacacaaagaacaggcctatgaaaaa
ctacgtcaaatgcaagcttatactcattctgaaacttgtcttcaacgctatattctccaa
tattttggcgatgaaggtgaaaattgtggaaaatgtacgaattgcttagacgaccgtgaa
caattagatattacggtagacgcgcaaaaagtactttcctgtgtcataaggatgggtgag
cgctttggaaaaacaatggtcgcacaagttctcgttggttctaaaaataaaaatttaacc
aaatggaactttgaacaactttctacctttgggattatgaaacaacactcacaaaaaaat
gtaggagagttgattgacttcttggtagccgaaggttatctccaagtcacacctggaaaa
tttcctctattatttgtgtcaactgagggtcatcaggttttacgaggtcatttgaatgtt
tttagacgtgctccctttgtcacggttgctcagaatgaaacgggggacaactttaattcc
aaactttttgatcacttgcgtacccttcgcctagaagttgcaaaggacgagggagtgcct
ccttttatgattttctctgacagtagtctgaaagatatggcagaaaaatcgcctcaagac
gaaacaagttttttatctatcagtggagtgggccctatcaagctcaaaaaatatgggcaa
gaatttatccaagtaattcaaaattttaataacaaaaaatga
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