Lentilactobacillus terminaliae: O0236_002180
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Entry
O0236_002180 CDS
T10897
Symbol
helD
Name
(GenBank) RNA polymerase recycling motor HelD
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
ltm Lentilactobacillus terminaliae
Pathway
ltm03420
Nucleotide excision repair
ltm03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ltm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
O0236_002180 (helD)
03430 Mismatch repair
O0236_002180 (helD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ltm03400
]
O0236_002180 (helD)
Enzymes [BR:
ltm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
O0236_002180 (helD)
DNA repair and recombination proteins [BR:
ltm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
O0236_002180 (helD)
MMR (mismatch excision repair)
Other MMR factors
O0236_002180 (helD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
AAA_19
UvrD_C
UvrD_C_2
Viral_helicase1
SLFN-g3_helicase
AAA_16
DEAD
AAA_30
NPHP3_N
NACHT
Motif
Other DBs
NCBI-ProteinID:
XFD40143
LinkDB
All DBs
Position
460860..463157
Genome browser
AA seq
765 aa
AA seq
DB search
MADSIKDQEQQHLNYVTDQIKVAENNFSSKVKSTKRDIKGINDNFGNDVRIKTDTYSGMM
ETAMSIRQQQQMLAERENRQEYAAKQLVTLTKLEKNPYFARIDFQENGEAKPETIYIGMA
SFTDRPDHYLIYDWRAPISSIYYNGGIGDVSYDTPDGVQTVDVQLKRQFQIEDGSIKTVF
DTEEVVGDQMLLDALGGHSDTKMKSIVTTIQKEQNKIIRDTSSELLFVQGAAGSGKTAAV
LQRVAYLLYQYSGKLHSGQIVLFSPNQLFNDYINQVLPELGEQNMVQMTFYQYSSHRLPS
IEVETLSQRFDEQFTGNARKVNEIKGSLDYFKAVTAYANHLNKEDMRFKNLVFQGKVLIP
KEKIAEIYYGFNENYNLRNRLSATKESLLKILNRKVRVEMKKDWVEEAVQNLTKEDIQRM
HADAEEEIENADKEFNFLARQIVIQSFRKVQRQINRNHFLSMNNQFVHMMRSLSQIIDLP
AYGLTEDDWKQVVENTIDRLKNGKLSIDDATTYLYLYDLMTGKRGERDIRYLFIDEVQDY
SAFQLAFLKFNFPRARFTVLGDLNQAIFTHENSHKLLDELSDMFDSEKTSVVQLTKSYRS
TAQITDFTKEILDDGAAIESFNREGEKPVISVAANEATAIETLKQQAAENLEEHETTAII
GKTLEECEQLSKKLKAAGVRATFVRTENQRLVNGIIIVPSFLAKGLEFDSIIMWNASKEN
YADEDDRQLVYTICTRAMHRLTIISVGELSPLFDKVDPSLYQLQD
NT seq
2298 nt
NT seq
+upstream
nt +downstream
nt
atggcagatagtataaaagaccaagaacagcaacatcttaattacgttactgatcaaatt
aaagtagctgaaaataatttttctagtaaggttaaatctactaagagagatatcaaagga
attaacgacaattttggcaatgatgtcagaataaaaactgatacatacagtggcatgatg
gagacagcgatgtcgattcgccaacagcaacaaatgcttgctgaacgtgaaaatcggcaa
gaatatgctgctaagcaattagtaacattaactaagttggaaaaaaatccatactttgcc
aggattgattttcaagaaaatggtgaagccaaaccagaaacgatttatattgggatggct
tcatttaccgaccgaccagatcattatttgatttatgattggcgggcaccaatttctagt
atttattacaatggtggaattggggatgtttcgtatgacactccagatggtgtccagaca
gttgacgtgcagttaaaacgtcaatttcaaattgaagatggcagcatcaagacggtcttt
gatactgaagaggtagttggagaccaaatgctactagatgctctgggtggccactcagat
accaagatgaagagtatcgtgactactattcaaaaagagcaaaacaagatcattcgggac
accagttcagagcttttgtttgtacaaggagccgctggttctggaaagacggccgcggta
ttacaacgagttgcttatttgctttaccaatattcaggaaaattacattcaggacaaatt
gtattgttctcgccaaaccaattgtttaatgattatattaatcaagtgttacctgaactt
ggtgagcaaaacatggttcaaatgactttctatcaatacagttcgcaccgattacctagt
attgaagtagaaactttatcacaaagatttgatgaacagttcactggaaatgcgcgcaag
gttaatgaaatcaagggtagcttagattactttaaggctgttactgcatatgctaaccat
ttaaataaagaggatatgaggtttaaaaacttagtattccaaggcaaagtattgattcct
aaggaaaagatcgccgaaatttactatggctttaatgagaattacaaccttcgtaataga
ctttcggcaactaaggaatcattactcaaaattttaaaccgcaaagtgcgagttgaaatg
aagaaggattgggtagaagaagcagttcaaaatctaactaaagaagatattcaacgaatg
catgcagatgcagaagaagaaattgaaaatgctgataaggaatttaatttcttagccaga
caaatcgttatccaatcatttagaaaagtgcaaagacaaatcaaccgtaaccatttcttg
agtatgaacaaccagtttgttcacatgatgcgcagcctttctcaaatcattgatttgcct
gcatacggtttgacagaagacgactggaaacaagttgttgaaaataccatcgaccgtttg
aagaatggtaaactgtctattgatgatgcaacaacttacttatatctatatgatttaatg
actggtaaacgtggcgaacgagacatcagatatttatttattgatgaagttcaagattac
tcagcctttcaattagcattcttgaagtttaatttccctagagctagatttactgtttta
ggtgatttgaaccaagcaattttcacccatgaaaacagccacaagttattagacgaactc
agtgacatgtttgatagcgagaagactagtgttgttcaacttactaagtcatatcgttca
actgcccagatcactgatttcactaaagaaatcttggatgacggtgctgcaattgagtca
ttcaatcgtgagggtgaaaagccagtgatttcagttgctgctaatgaagccacagctatt
gaaacattgaaacaacaggctgccgagaacttagaagagcatgaaaccaccgcgatcatt
ggtaaaactctagaagagtgtgaacaattgtctaagaagttaaaggctgctggtgtccgg
gcaacatttgtcagaactgaaaatcaacgattagtgaatggaattatcatcgtgccatca
ttcttagctaaaggtttggaatttgatagtattattatgtggaatgcatcaaaggaaaat
tacgctgatgaagatgatcgccaattggtttacactatttgtactagagcgatgcatcga
ttaactattatctctgttggtgagttatcaccattatttgataaggttgatccatcactt
taccagctacaggactga
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