Lentilactobacillus terminaliae: O0236_006160
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Entry
O0236_006160 CDS
T10897
Symbol
rny
Name
(GenBank) ribonuclease Y
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
ltm Lentilactobacillus terminaliae
Pathway
ltm03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ltm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
O0236_006160 (rny)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ltm03019
]
O0236_006160 (rny)
Messenger RNA biogenesis [BR:
ltm03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
O0236_006160 (rny)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
HDOD
KH_PNO1_2nd
KH_KhpA-B
KH_NusA_2nd
YycC
KH_2
LMBR1
Motif
Other DBs
NCBI-ProteinID:
XFD39016
LinkDB
All DBs
Position
complement(1225448..1227028)
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AA seq
526 aa
AA seq
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MNLAGIILAIIAILVVGIVGFISFRMGTNIQKKNQLREEQATNSSANEIIAEAKKQADTL
VKEAKLTAQEDNHRYRSNVENELKKRRSELQKQEDRLLQREEALDRKDNSFEKRENSLNR
KEQKINKEQQQLLLQQKEANSLIEARQSEIEKVAGLSSEQARDLILKETDAQLADEKARM
VKASYDKAAAEADENAKNLIVDAIQQSSADVVSETTVTVVNLPNEDMKGRIIGREGRNIR
TFETLTGVDLIIDDTPEAVVLSGFDPIRREVAKMTLEKLIKDGRIHPARIEEMVDKSRKE
LEQRIQEIGEEALFELGIHSMGPDMIKLVGQLNFKIVNGQNLLSHSIEVARLTGALASEL
GEDVTLAKRAGLLHDIGKATDSGVEGSHVDVGVDLAKKYHESAVVIDSIAAYHEGNQPEF
IISELVAVAEKIAISRPGAYSESLESFVHRLDSLEKITDSFDEVKKSYAIQAGREIRVIA
KPNEVSDIQAIALSRNIKQKIESEMKYPGHIKVTVIREVRSVEYAK
NT seq
1581 nt
NT seq
+upstream
nt +downstream
nt
atgaatttggctggaataatcctcgcaatcatcgctattcttgttgttggtattgttgga
tttattagttttcggatgggcacaaacatccaaaagaagaatcaattacgtgaagaacaa
gctactaacagtagtgctaacgaaattattgcagaagccaaaaagcaggctgatacatta
gttaaggaagcaaaattaactgcccaagaagacaatcatcgttatcgaagtaacgttgag
aacgaattgaaaaaacgtcgttcagaacttcaaaagcaggaagatagattgttgcaacgt
gaagaggctctggacagaaaagataattcttttgaaaaacgggagaacagtcttaaccgg
aaagagcaaaaaattaataaagaacaacagcagttactgttacaacaaaaagaagcaaac
tcacttattgaagcgcggcaatcagagattgaaaaggtagctggattatcaagcgaacaa
gcacgagatctgattttgaaggaaactgatgcacagttagcagatgaaaaggctcgcatg
gtcaaagcaagctatgataaagctgctgctgaagctgatgaaaatgccaaaaacttaatc
gttgatgcaattcaacaaagttcggcggatgtcgtttctgaaacaactgtcacagttgtt
aacctgcctaacgaagatatgaagggtagaattattggtcgtgaaggccgtaatattcga
acttttgaaacccttactggagtcgatttgattatcgatgatactccggaagcggttgtc
ctcagtggctttgatccaattagaagagaagttgccaaaatgactctcgaaaaattgatc
aaagatggtcgaattcatccagctcggattgaagagatggttgataagagccgtaaggaa
cttgaacagagaatccaagaaattggtgaagaagcgctgttcgagctaggaatccattcc
atgggtcctgacatgattaagctagttggtcagttaaacttcaagattgttaatggtcag
aatttgctgagtcattcaattgaggttgctagattaactggcgcattagcgtctgaatta
ggtgaggatgttactttagctaaacgcgcaggattattacacgatataggtaaagccact
gacagcggcgttgaaggttcacatgtcgatgttggtgtagatttagcgaagaaatatcat
gaaagcgcagtggtcattgattccattgctgcttaccatgaaggtaatcaaccagaattt
attatttctgaattggttgctgtagcagaaaaaattgcaatttctagaccaggtgcatac
agcgaatctttggaaagctttgttcatcgtctagatagtttggaaaaaatcactgatagt
tttgatgaagttaaaaagagttacgctatccaagctggtcgagagatcagagtgattgct
aaaccaaatgaggtttcagatattcaggcaattgcactttcaagaaacattaaacaaaaa
attgaatctgaaatgaagtatccgggacatattaaagtcacggtaattcgagaagtcaga
tcagttgaatacgcaaagtaa
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