Lentilactobacillus terminaliae: O0236_009570
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Entry
O0236_009570 CDS
T10897
Symbol
rny
Name
(GenBank) ribonuclease Y
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
ltm Lentilactobacillus terminaliae
Pathway
ltm03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ltm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
O0236_009570 (rny)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ltm03019
]
O0236_009570 (rny)
Messenger RNA biogenesis [BR:
ltm03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
O0236_009570 (rny)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
HDOD
YfbR-like
ATG16
DUF7946
REF
ISG65-75
DUF2140
PFF1_TM
Motif
Other DBs
NCBI-ProteinID:
XFD39630
LinkDB
All DBs
Position
complement(1807448..1809037)
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AA seq
529 aa
AA seq
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MVITIILAVIVAVIAGIVGQKSEQKKHDQAIQQAQQQAGQMVHAAEKEAKQVAEEVVTNG
KTETENYQASIDEELDSYEADNRIRQSRIDQRTNGVEQVKQRLDKMHNELAERQSELDDI
QTEIDKLAVQAEQLANKRRQVLQDNGDLSYEEAARQITDQLAIDLDREREVELRYQNDEA
KVIAPKMAKQLADDAIQRGPVDYPREHVEHSVVLPDQGTKQKLLGKENINLRYIETLTGV
DIVFDRNEPLMLHVVTSDPLRREIARTVIGNLMVTRQINSQTIEQQVDTVSSNLMSEIRK
TGEDVATSLHIGFVHPDEMKLIGRLRYRTSYGQNVLTHSIEVAKIAGILAAEFGLDVQIA
KRAGLFHDIGKAIDHDIDSTHVELGVQIAQQYDEDEQVVNSIASHHGDVDVTTPIANLVA
AGDSISGGRQGARSESAEEYINRLRSLEKIAGQKPGVKDSFAIQAGREIRVMVDPNQIND
EKNQELAAQISNQIENELTYPGKIKVTLIRSFKAVSYVGAEKKKKKKRA
NT seq
1590 nt
NT seq
+upstream
nt +downstream
nt
ttggtaataacaattatattagctgttattgttgctgtgattgctggaatcgttggacaa
aagtccgaacaaaaaaagcatgaccaagcaattcaacaggcccaacagcaagcgggacaa
atggttcacgctgctgaaaaagaggcaaaacaagtcgctgaagaagtcgttacaaacggc
aagacagagactgaaaattatcaagcatctattgatgaagaacttgatagctacgaagca
gataaccgaattcgccagtcacgaattgatcaacgtaccaatggcgttgaacaggttaaa
caacgtttagataaaatgcataatgaactagctgagcgccaatctgagttagatgatatc
cagactgaaattgataaattagctgttcaggctgagcaactagctaacaaacggcgccaa
gtgcttcaagataacggtgatttaagttatgaagaagccgctagacagatcacagatcaa
ttagcaatagatttagatcgcgaacgagaagttgaacttagatatcaaaacgatgaagcc
aaagttattgcacctaagatggctaagcagttggctgacgatgcaattcaacgaggcccc
gttgattatcctcgtgaacacgttgagcattcggttgttctacctgaccagggaactaag
caaaagctgttaggtaaagaaaatatcaatttaaggtatattgaaaccttaactggtgtc
gatattgtctttgatcgtaatgaaccgttgatgttgcacgttgtgacttcagatccatta
cgccgagaaatcgctagaacagttattggtaatctgatggttaccagacagataaactcg
caaaccatcgaacaacaagtcgacacggtttcaagtaatctcatgagtgaaatcagaaaa
actggtgaggatgttgctaccagcttacacattggtttcgttcatcccgatgaaatgaaa
ttaattggtagattaaggtatcggactagttatggtcaaaatgttttgacccactcaatc
gaagttgctaagattgctggaatattagctgctgaatttggtttagatgttcaaatcgcc
aaacgagcaggattattccatgatattggtaaggcaattgaccatgatattgacagtacc
cacgttgagttgggtgttcaaatcgctcaacaatatgatgaagatgaacaggttgttaat
tcaatcgcatctcaccatggtgatgtggacgttacaacgccaatcgctaatttagttgct
gctggtgactccatttcgggtggtcgtcaaggagctagaagtgagtctgcagaagaatat
atcaatcgattgcgtagcttagagaagattgctgggcaaaagccgggcgtcaaagatagt
tttgctattcaggctggtcgagaaattcgagttatggttgaccctaatcagatcaatgat
gagaagaatcaggaacttgccgcacaaattagcaatcagattgaaaatgagttaacgtat
cctggtaagatcaaggtaactttgattagaagcttcaaagcagtgtcatatgttggtgct
gaaaagaagaagaaaaagaaacgggcataa
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