Leucobacter tenebrionis: KVY00_04995
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Entry
KVY00_04995 CDS
T09454
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
ltn
Leucobacter tenebrionis
Pathway
ltn03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
ltn00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
KVY00_04995
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ltn03021
]
KVY00_04995
03400 DNA repair and recombination proteins [BR:
ltn03400
]
KVY00_04995
Enzymes [BR:
ltn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
KVY00_04995
Transcription machinery [BR:
ltn03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
KVY00_04995
DNA repair and recombination proteins [BR:
ltn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
KVY00_04995
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-ProteinID:
QZY52801
LinkDB
All DBs
Position
complement(1052917..1056813)
Genome browser
AA seq
1298 aa
AA seq
DB search
MLEGTDFNELQIRLATADDIRSWSFGEVKKPETINYRTLKPEKDGLFGEQIFGPSRDWEC
ACGKYKRVRYKGIVCERCGVEVTKSSVRRERMGHIELAAPVTHIWYFKGVPSRLGYLLDM
APKDLEKVIYFAAYMIIDIDDEGRREDMAELEAELRLELKALEDQRDIAIAQRQQQAESD
LAALEAEGAKADQRRRAEASAEKEMAAIRKGFDDDIARLQRVWEDFRNLKVGDLKPEDAV
FADLMDRYGDYFEAYMGAEAIKKRLESFDLEAEAETLHLQIAEGKGQKKIRAIKRLKVVS
AFLQTGASPAAMVLDVVPVIPPELRPMVQLDGGRFATSDLNDLYRRVINRNNRLRRLLDL
GAPEIIVNNEKRMLQEAVDALFDNGRRGRPVTGTGNRALKSLSDMLKGKQGRFRQNLLGK
RVDYSGRSVIVVGPQLKLHQCGLPKQMALELFKPFVIKRLMDLSHAQNVKAAKRMVERSR
SEVWDVLEEIIRERPVLLNRAPTLHRLGIQAFEPQLVEGKAIQLHPLVCAAFNADFDGDQ
MAVHLPLSVEAQAEARVLMLASNNILKPSDGRPVTLPSQDMIIGLHHLTTVKKDAAGTGR
AFGSIAEAILAMDEGTLDLGSKVKLRLTGYTDANGVTSEKPVLVETTLGRAIFNEALPAD
YPYFERVADKGSLSGLVNDLAERYPKVEVAATLDRIKDAGFYWASRSGVTVSLSDVVTPA
NKGEIIAEHEKRAAKVQRDYDRGMISDGDRRKALTDIWTEATDEVAAAMRESFPEDNTIF
RMVSSGARGNWLQIRNIAGMRGLVSNPKGEIIPRPIINSYREGLSVAEYFIATHGARKGL
ADTALRTADSGYLTRRLVDVSQDVIIREEDCGTRRGLDLPIAAADANGVLVRDENVENSV
YARTLATDAVSPDGTVVASAGDDVGDVLIDKLVEAGVTEIKVRSVLTCASAVGVCATCYG
RSLATGQRVDIGEAVGIIAAQSIGEPGTQLTMRTFHTGGSASADDITQGLPRVQELFEAR
TPKGASPIAEAAGRITIEDTEKSRRILLTPDDGTEEKQYPVLKRATLLVEDGDHVELGQP
FLAGTLDPKDILQVGSTTEDGKHIPGERAVQKYLVEGVQGVYRSQGVPIHDKHIEVIVRQ
MLRKVTVVDHGETELLPGELVDRSRYQRINREALLEGKRAATARPEVMGITKASLATESW
LSAASFQETTRVLTQAAMEGSKDPLIGLKENVIIGKLIPAGTGLSTYRDVEVEATEEAKA
ERYPNRLFATEGTFDENDLSFVDFDSFTADEFNPGNYS
NT seq
3897 nt
NT seq
+upstream
nt +downstream
nt
ttgctcgagggtacagatttcaacgagctgcagatccgtctggccacggccgacgacatc
cgcagctggtcgttcggcgaggtcaagaagccggagaccatcaactaccgcacgctgaag
ccggagaaggacggtctgttcggcgaacagatcttcggaccgagccgcgactgggagtgc
gcgtgcggcaagtacaagcgcgtccgctacaagggcatcgtctgcgagcgctgcggcgtc
gaagtgacgaagtcgagcgtgcgccgcgagcgcatgggccacatcgaactggccgcgccc
gtcacgcacatctggtacttcaagggtgtgccgtcccgtctgggctacctgctcgacatg
gcgccgaaggatctcgagaaggtcatctacttcgctgcgtacatgatcatcgacatcgat
gacgagggccgccgcgaggacatggcggagctggaggccgagctgcgtctcgagctgaag
gcgctcgaggatcagcgcgacatcgcgatcgcgcagcgccagcagcaggccgagtcggat
ctcgccgcgctcgaggccgaaggggcgaaggcggatcagcgccgtcgcgccgaggcctcg
gccgagaaggagatggcggcgatccgcaagggcttcgacgacgacatcgctcggctgcag
cgcgtgtgggaggacttccgcaacctcaaggtgggcgacctcaagcccgaggacgcggtg
ttcgccgacctcatggatcgctacggcgactacttcgaggcctacatgggcgccgaggcg
atcaagaagcgcctcgagtccttcgatctcgaggccgaggccgagacgctgcacctgcag
atcgccgagggcaagggccagaagaagatccgcgcgatcaagcgcctgaaggtcgtcagc
gccttcctgcagacgggtgcgagcccggccgcgatggtgctcgacgtcgtgccggtgatc
ccgcccgagctccgcccgatggtgcagctcgacggcggccgcttcgcgacctccgatctc
aacgacctctaccgtcgcgtgatcaaccgcaacaaccgtctgcgccgcctgctcgatctc
ggcgcccccgagatcatcgtcaacaacgagaagcgcatgctgcaggaggccgtcgacgcg
ctgttcgacaacggccgccgcggtcgccccgtgaccggcacgggcaaccgcgccctgaag
tcgctgagcgacatgctcaagggcaagcagggccggttccgccagaacctgctcggcaag
cgcgtcgactactcgggccgttcggtcatcgtggtcggcccgcagctcaagctgcaccag
tgcggtctgcccaagcagatggcgctcgagctgttcaagccgttcgtgatcaagcgtctc
atggatctgtcgcacgcgcagaacgtgaaggccgcgaagcgcatggtggagcgctcccgc
tccgaggtgtgggacgtgctcgaggagatcatccgcgagcgccccgtgctgctcaaccgc
gcgccgacgctgcaccgcctcggcatccaggcgttcgagccgcagctcgtcgagggcaag
gccatccagctgcacccgctcgtctgcgcggccttcaacgccgacttcgacggcgaccag
atggctgtgcacctgccgctgtcggtcgaggcccaggccgaggcccgcgtgctgatgctc
gcctcgaacaatatcctgaagccgtcggacggccgcccggtgaccctgccctcgcaggac
atgatcatcggcctgcaccacctcaccacggtcaagaaggacgccgccggcaccggccgc
gcgttcggctcgatcgccgaggcgatcctggcgatggacgagggcaccctcgacctgggt
tcgaaggtcaagctgcgtctcaccggctacaccgacgcgaacggcgtcacctccgagaag
cccgtgctggtcgagaccactctcggccgcgcgatcttcaacgaggcgctgccggccgac
tacccctacttcgagcgcgtggccgacaagggcagcctctcgggcctggtcaacgacctc
gccgagcgctacccgaaggtggaggtcgcggcgaccctcgaccgcatcaaggacgcgggc
ttctactgggcatcgcgctcgggtgtgacggtgtcgctctccgacgtcgtgaccccggcg
aacaagggcgagatcatcgccgagcacgagaagcgcgcggccaaggtgcagcgcgactac
gatcgcggcatgatcagcgacggcgaccgccgcaaggcgctcaccgacatctggacggag
gcgaccgacgaggtggccgccgcgatgcgcgagtccttccccgaggacaacaccatcttc
cgcatggtgtcgtcgggcgcccgcggtaactggctgcagatccgcaatatcgcgggtatg
cgaggcctggtgtcgaacccgaagggtgagatcatcccgcgtccgatcatcaactcgtac
cgcgagggcctctcggtggcggagtacttcatcgcgacccacggcgcccgtaagggcctc
gccgataccgctctgcgcaccgccgactcgggttacctgacccgtcgtctggtcgatgtg
tcgcaggacgtcatcatccgcgaggaggactgcggcaccaggcgcggactcgacctcccg
atcgccgcggccgacgcgaacggcgtgctcgtgcgcgatgagaacgtcgagaactcggtc
tacgcccgcaccctcgccaccgacgcggtgtcgcccgacggcaccgtcgtggcgagcgcc
ggcgacgacgtgggcgacgtgctcatcgacaagctggtggaggccggcgtgaccgagatc
aaggtgcgctccgtgctcacctgcgcctcggccgtgggcgtctgcgccacctgctacggc
cgctcgctcgcgaccggtcagcgcgtcgacatcggcgaggcggtcggcatcatcgccgcc
cagtcgatcggcgagcccggtactcagctgacgatgcgtacgttccacacgggtggttcg
gcctcggccgacgacatcacccagggtctgcctcgcgtgcaggagctgttcgaggcgcgc
accccgaagggcgcgtcgccgatcgccgaggccgctggccgcatcacgatcgaggacacc
gagaagagccgccgcatcctcctcacgccggacgacggcaccgaggagaagcagtacccc
gtgctgaagcgcgccacgctgctcgtcgaggacggcgaccacgtcgagctcggccagccg
ttcctggcgggcacgctggatccgaaggacatcctgcaggtgggctccaccaccgaggac
ggcaagcacatcccgggcgagcgcgcggtacagaagtacctcgtcgagggcgtgcagggc
gtctaccgctcgcagggcgtgccgatccacgacaagcacatcgaggtgatcgtgcgccag
atgctgcgcaaggtgaccgtggtggatcacggagagaccgagctgctcccgggcgagctc
gtcgaccgttcgcgctaccagcgcatcaaccgcgaggcgctgctcgagggcaagcgcgcc
gcgaccgcgcgccccgaggtcatgggtatcaccaaggcctcgctcgcgaccgagtcgtgg
ctctcggcggcctccttccaggagaccacccgagtgctcacgcaggcggcgatggaggga
tcgaaggatccgctcatcggcctcaaggagaatgtcatcatcggtaagctcatcccggcc
ggtaccggcctgagcacctaccgcgacgtcgaggtcgaggcgaccgaggaggcgaaggcg
gagcgctacccgaaccgcctgttcgcgaccgagggcaccttcgacgagaacgacctctcg
ttcgtggacttcgacagcttcaccgctgacgagttcaacccgggcaactactcctaa
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integrated database retrieval system
