KEGG   Limnobacter thiooxidans: RGQ30_00170
Entry
RGQ30_00170       CDS       T09704                                 
Name
(GenBank) DEAD/DEAH box helicase family protein
  KO
K01153  type I restriction enzyme, R subunit [EC:3.1.21.3]
Organism
lto  Limnobacter thiooxidans
Brite
KEGG Orthology (KO) [BR:lto00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:lto02048]
    RGQ30_00170
Enzymes [BR:lto01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.3  type I site-specific deoxyribonuclease
     RGQ30_00170
Prokaryotic defense system [BR:lto02048]
 Restriction and modification system (R-M system)
  Type I R-M system
   RGQ30_00170
SSDB
Motif
Pfam: SWI2_SNF2 HSDR_N ResIII T1R_D3-like DEAD RSS_P20 COG4_C DUF6975
Other DBs
NCBI-ProteinID: BET24516
UniProt: A0AA86JD02
LinkDB
Position
19029..22115
AA seq 1028 aa
MTNIHKELHFENEICAHLVANGWLHSANDKGYDRDLALFPEDLIWWIQETQPETWNKVKA
MHNGSTQKKLLERLVKVLTADGTLSVLRHGFKDVSAGRVNLCQFKPATTLNATTIENYGK
VRLRVIQQVHYSTSNNNSIDLVFFVNGIPVATSELKTDFTQSIEDAVKQYKFDRLPKDKS
TKKEEPLLAFKRGALVHFAVSTEEVQMTTKLDGVNTRFLPFNLGDNGGKGNPENPNGFKT
TYFWEYVLQRDNFLDILGRFMHLESVDKIDKKTGKRVTKTAMIFPRFHQFDAVSKLIATA
KVEGAGHRYLTQHSAGSGKTNTIAWTAHQLSSLHGADNKKVFDSVIVVTDRTVLDSQLQD
AIYQFEHKQGLVKCIKSEMGDSKSAQLAQALISNTPIIIVTIQTFPFVIEALASANMAGK
KYAIIADEAHTSQSGAVANKVKNVLSPAEKQELEDGGEIDIEAMLEAEMASRAQPKNISY
FAFTATPKSKTMELFGRPNGDGKPAPFHLYTMQQAIEEGFILDVLKNYTPYKLAFKIAHD
GQDYDSETVDRSKALKSLMKWVRLHPYNIAQKVEVIVEHFKANVAWRLDGKAKAMVVTGS
RKEAVRYKVAIDKYITKKISEDKTYQGLQAMVAFSGTVIDSETGPGEFTEYNLNPGLNGR
DLRDAFDEDDYQVMIVANKFQTGFDQPLLVSMYVDKKLSGVAAVQTLSRLNRTYPGKDVT
FVLDFVNDPSEILESFAPYYRAAQLSEVSDPNVIFDLQSKLDAAQIYTNQEVDNLVEVLL
KKPTQAAVSRCLQPAQSRFKDGLKAAKASDDSLEVEKLETFKKNVGSFVRAYDFLSQIIN
YSDTELEKRSMFLRLLQRLLIVEIDDEEIDLEGIELTHYQLRNKGKHDIPLAKTEGSVLY
PAILDLGTTKTLEETERVYWNEIIDKVNKLFEGDQLTDADAIAVFNHVADKMTENEALKE
QATANTEQQFGASPDYKKVMNDAFIACFENHQSIIQQLLTNPRVKDQFAELLLPHVYGKL
TKPDQKHF
NT seq 3087 nt   +upstreamnt  +downstreamnt
atgacaaacattcacaaagaactgcacttcgaaaacgagatttgcgctcacttagtcgcc
aacggttggcttcattcagcaaatgacaaaggctacgaccgtgatctagctctgtttcct
gaagatctgatctggtggatccaagagactcagcctgaaacctggaacaaggttaaggct
atgcacaatggctcgactcagaagaaacttttggaacgcctggttaaggtattgaccgcc
gatggcacgctttcagtgttgcgtcatggatttaaggatgtgtctgccggccgtgtgaat
ctttgtcagttcaaacctgccacaacgctaaatgcaaccactattgagaattacggcaag
gtgcgtttgcgtgtcatccagcaagtccactattccacgagcaacaacaactcgatcgac
ttggtgtttttcgtcaacggcattcctgttgccacgtccgagttgaaaactgactttact
cagtcgatcgaagatgccgtgaagcagtacaaatttgaccggctccctaaggacaaatcg
accaaaaaggaagagccgcttctcgcgttcaaacgtggagcgttggtgcactttgccgtc
agcactgaagaagtgcagatgaccacgaaactggacggggtgaatacccgcttcttgccc
ttcaatttgggcgacaacggcggcaaaggaaatcctgaaaaccccaacggtttcaagacg
acgtacttctgggaatacgtgcttcagcgggataacttcttggacattctcgggcgcttc
atgcacctggagagcgtcgataaaatcgacaagaagacgggtaagcgggtgactaaaacc
gccatgatctttccacggtttcatcagttcgacgctgtgtccaaacttattgcaactgca
aaggtggaaggtgccggccaccggtatttgacccagcactctgcgggctctggcaaaaca
aatacgattgcctggactgcccaccagttatctagccttcacggtgcggacaacaaaaag
gtcttcgacagcgtaattgttgtgactgatcgcactgtcttggacagccagctacaggat
gcgatttatcaatttgagcacaagcaaggtttggtgaaatgcatcaaatctgaaatgggt
gattcgaaatcggctcaacttgctcaggcattgatcagcaatacgcccatcattattgtc
accattcaaactttcccctttgtgattgaggctttggccagtgcaaacatggcggggaaa
aagtacgcgatcattgcggacgaagcccatacctcccagtctggggctgtggccaacaag
gtaaagaatgtgctatcgcctgcggaaaagcaggagctggaagacggtggcgagatcgac
attgaagccatgttggaagctgaaatggcttctagggcccagcctaaaaacatcagctac
tttgccttcaccgccacaccgaagagtaagaccatggagcttttcgggcggcccaatggc
gatggcaagccagcgcccttccacctgtacaccatgcagcaagctattgaagagggcttt
attcttgatgtactgaagaattacaccccctacaagctagcgttcaaaatcgcccatgac
ggccaggactacgactcggaaaccgtggaccgcagcaaggctctcaaaagcttgatgaag
tgggttcggcttcacccctacaacattgcccaaaaagtcgaagtaatagttgagcacttc
aaggccaacgtagcttggcgtttggatggcaaagccaaggccatggtggtcaccggctcc
cgcaaagaggctgtgcgctacaaggtggcaattgacaaatacatcaccaaaaagatctct
gaggataagacctaccagggccttcaggccatggtggcgttttcaggaactgtgatcgac
tccgaaactgggcctggtgagttcactgaatacaacctgaaccctggcttgaatggccga
gatctgcgagatgcgttcgatgaggacgactaccaggtcatgattgtggccaacaaattc
cagaccggctttgaccaacctttgttggtttccatgtatgtagacaagaagctctcgggt
gtggccgcggtgcaaaccctctctcgcttgaaccgcacctatcctggtaaagacgtcacc
ttcgttttggacttcgtgaatgacccaagtgagattttggagtcgtttgcgccctactac
cgcgcagcccagttgtccgaggtgtcggatcccaacgtgatcttcgacttacaatctaag
cttgatgctgcccagatttacaccaaccaggaagttgacaacttggttgaagtgcttctg
aaaaagccaactcaggcggcggtaagccgctgcctgcagccggcgcaaagccgattcaaa
gatggactgaaggcggccaaggcgagtgacgattccctagaagttgaaaaactggaaacc
ttcaaaaagaacgttggctcgtttgtgcgtgcctatgatttcttaagccagatcatcaat
tactccgacaccgagcttgaaaagcgcagcatgttcttgcgcttgctgcagcgtttgctg
atcgtggaaattgatgatgaagagatcgaccttgaaggtattgagctgactcattatcag
cttcgtaacaagggtaagcacgacataccattggccaaaacggaaggctcagttctttac
cccgcaatattggacttgggaacgaccaagacactggaagagacggaacgggtgtactgg
aacgagatcatcgacaaggtgaataagctgttcgaaggtgatcagctgaccgatgccgac
gccatcgccgtgttcaaccacgtggcggacaagatgactgaaaatgaggcgctgaaggag
caagccacagcgaacactgagcagcagtttggtgccagtcccgattacaagaaggtgatg
aacgatgcttttattgcgtgttttgagaaccaccaaagcatcattcagcaactgttgacc
aatccaagagtgaaagaccagtttgcagagctgctgttgccgcatgtttatggaaagttg
actaaaccagaccaaaaacatttttga

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