KEGG   Limnobacter thiooxidans: RGQ30_00280
Entry
RGQ30_00280       CDS       T09704                                 
Name
(GenBank) hypothetical protein
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
lto  Limnobacter thiooxidans
Pathway
lto03030  DNA replication
lto03430  Mismatch repair
lto03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:lto00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    RGQ30_00280
   03430 Mismatch repair
    RGQ30_00280
   03440 Homologous recombination
    RGQ30_00280
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:lto03032]
    RGQ30_00280
   03400 DNA repair and recombination proteins [BR:lto03400]
    RGQ30_00280
Enzymes [BR:lto01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     RGQ30_00280
DNA replication proteins [BR:lto03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     RGQ30_00280
DNA repair and recombination proteins [BR:lto03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     RGQ30_00280
SSDB
Motif
Pfam: RNase_T S6PP_C
Other DBs
NCBI-ProteinID: BET24527
UniProt: A0AA86IWV1
LinkDB
Position
complement(29488..30078)
AA seq 196 aa
MTEDLIEFLKHFDDTLQFGSFVSLDLEMANSNDLTSLIQIGCIQFTNGPNWSERKSLNRL
VRYLGEFDWYASKNIHGIRKRDVLQSPSSETVYRKFKALADHTGLIVHYSGRERQVMNAL
SNKYGIEKPKAEWLDLHRAVKKRFPEYRKQGGGLKAMAEFYGLNLDHHDAYSDALTTAKV
FMQLIRELHTHSKTSA
NT seq 591 nt   +upstreamnt  +downstreamnt
atgacagaagatttgatcgaatttttgaagcactttgacgacactctgcagtttgggagt
tttgtatccttagatttggaaatggccaactcaaacgaccttaccagcttgattcaaatt
ggctgtattcagttcactaatggccccaattggtcagagcgtaaatcgttgaaccggctt
gttagatacctgggtgagtttgattggtatgcctctaaaaatatccacggaattcgaaag
cgcgatgtactccaatcgccatcaagcgaaaccgtctatcgcaaattcaaggccctcgct
gatcatactgggctcatcgttcattattcgggtcgggagcgtcaagtgatgaacgcattg
agcaacaagtatggaattgagaaaccgaaagccgaatggcttgatttacatagagcagtg
aaaaaacgatttcctgagtatcgcaaacaaggaggagggctgaaggcgatggctgagttt
tacggattgaacttggatcatcatgacgcctattctgatgctctgaccacagctaaagtg
ttcatgcagcttataagggaactccatacacatagtaaaaccagtgcatag

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