Limnobacter thiooxidans: RGQ30_00380
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Entry
RGQ30_00380 CDS
T09704
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
lto
Limnobacter thiooxidans
Brite
KEGG Orthology (KO) [BR:
lto00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lto02000
]
RGQ30_00380
Transporters [BR:
lto02000
]
Other transporters
Pores ion channels [TC:
1
]
RGQ30_00380
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
OMP_b-brl_3
Motif
Other DBs
NCBI-ProteinID:
BET24537
UniProt:
A0AA86MH00
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All DBs
Position
complement(38164..40263)
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AA seq
699 aa
AA seq
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MNRIQFERRAVALASLLFIAQAHTLAQAQQSAPLAVLESVVVTGTAVQPESITKPFSVVG
DDELNASGASTLGEALRYQPGISATGFGPNSSRPIVRGQDSDRIKILRNSAATVDVSALS
FDHALPVDPFALHQVEILRGPAALAYGGNAVGGVVNLVDQRIARKPVQGLQGEVNLLGGG
AADQTAGGFKLDGGLGQGVSIHLDGFKRTTGDLETPTFTDPDGVTGRRVQNSSSRSDGAA
IGASIQTGNGYVGVSAERYNNDYGVPKKLDVRIGMESERYALEGEQNFQGEAIQSIKYRL
AKTDYQHQEFEDGTPATVFLNDGVDGRIELGLSPFTLAGLNVSTQAGVQFERTDFSAIGD
EAFVPNTSTDQTGLFSIFRASTSQTNSGVFEFGVRVDQVDVNAASSGLSGLTGPVAGAGV
TAGPAINRAFSPTSLSLGYTTPIGNGWSLGGSVSRVERAPSSFELYADGVHVATDAYEKG
NPTLEEERGRHFELTSTWAQGASKFNATAFASRYSNYIALIGRTGADSIFDENEDGDADP
TTGEVLQVFDFTAVPAEFQGLEIGYQTAYKLGAGQVKPAIQYDLVRGKRTDGGGNLPRIS
PQRVLASLAYSQQGWTVTPEIIWVDKSKAGEGDTQVDAYQLVNLRVGKAFTWGTTGGEVF
ANLQNLTNELAFSATTLNTVRGYTPLAGRSALVGVKLAF
NT seq
2100 nt
NT seq
+upstream
nt +downstream
nt
atgaaccgaattcaatttgaacgccgggccgttgccttggccagcctgctttttatcgca
caagcacacacattggcccaggcccaacaatctgcacccttggcggtgcttgagtctgtg
gtggtcaccggcacagccgtacagcctgaatccatcaccaaacctttctctgtcgtaggc
gacgatgaactgaacgccagtggcgccagcacgctgggtgaggcactgcgctatcaaccc
ggcatttcagccactggctttggccccaactcaagccggccgattgttcgtggtcaggac
tcggatcgaatcaagattctgcgcaactcggcagccacagtagatgtatccgcactcagt
ttcgatcacgccttgcccgtagacccgtttgccctgcaccaggttgaaatactgcgtggg
cctgctgcactggcctacggtggcaacgccgtgggtggcgtggtcaatctggtagaccag
cgcattgcccgcaaaccggttcaaggcctacagggtgaagtcaacctgttgggcggtggt
gcagccgatcaaaccgcgggcggcttcaagcttgatggtggtctggggcaaggggtcagc
attcacctggatggtttcaaacgcaccaccggcgaccttgaaacccccactttcactgac
cccgatggcgtcactggtcggcgtgttcaaaactcctcatccagatcagatggggcagca
atcggcgcatcgattcaaaccggcaatggctacgtgggtgtgtccgctgaacgttacaac
aacgactatggcgtgccgaaaaagctggatgttcgaatcggcatggaaagcgaacgctac
gcactggaaggcgagcaaaatttccaaggcgaggccattcaaagcatcaaataccgactg
gccaaaacagactaccaacaccaggagtttgaagatggaacccccgccactgtgtttctc
aatgacggcgtggatggtcgcatcgagctgggcttaagccccttcacactggctggcttg
aatgtgagcacacaggccggtgtgcaatttgagcgcactgatttttctgccattggtgac
gaagctttcgtaccgaataccagcaccgatcaaaccggactgttcagcatcttccgtgca
agcacaagccagacgaacagtggcgtattcgagtttggtgttcgggtggatcaggtagac
gtgaatgccgccagcagcggtttgtccggcttgactgggcccgtggctggtgccggtgtt
accgcaggtccagccattaatcgcgcgttcagccccacttccctgtcattggggtacaca
acccccatcggaaatggctggtccctgggcgggtcggtttctcgtgttgaacgtgcacct
tccagcttcgaactatatgccgacggtgtgcatgtggccaccgatgcctatgagaagggc
aacccaacccttgaagaagaacgtggtcgccattttgaactgaccagtacttgggcacaa
ggcgcatcaaaattcaacgccaccgcctttgccagccgctacagcaactacattgccctt
attggccgcaccggtgctgattcaatttttgacgaaaacgaggatggggatgcagacccc
accaccggtgaagtgctccaggtgtttgatttcaccgccgtacccgccgagtttcaaggc
ttggaaatcggctaccaaacagcttacaagctgggtgcaggtcaagttaaaccagccatt
cagtacgatctggttcgtggcaaacgcaccgatggcggtggcaacctgccacgcatcagc
ccgcagcgcgttctggccagcttggcttacagccagcagggatggacagtgacgccagaa
atcatctgggttgacaaaagcaaagctggcgaaggcgacacccaggttgacgcctatcag
cttgtgaacctgcgcgtgggcaaggctttcacttggggaacaacaggtggcgaagtattc
gccaacctgcaaaacctgaccaatgaactggcgttctcggccactaccctgaacacggtt
cggggttacacccccttggccgggcgttctgccttggtgggtgtcaaactggctttctaa
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