KEGG   Limnobacter thiooxidans: RGQ30_01300
Entry
RGQ30_01300       CDS       T09704                                 
Symbol
tssH
Name
(GenBank) type VI secretion system ATPase TssH
  KO
K11907  type VI secretion system protein VasG
Organism
lto  Limnobacter thiooxidans
Pathway
lto03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:lto00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    RGQ30_01300 (tssH)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:lto02044]
    RGQ30_01300 (tssH)
Secretion system [BR:lto02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   RGQ30_01300 (tssH)
SSDB
Motif
Pfam: AAA_2 AAA_lid_9 AAA ClpB_D2-small AAA_5 AAA_22 AAA_16 AAA_14 Sigma54_activat AAA_7 nSTAND3 Zeta_toxin TniB ResIII AAA_18 NBD_SMAX1 Hpr_kinase_C DUF6657 CbiA NACHT Torsin Amphi-Trp SRP54
Other DBs
NCBI-ProteinID: BET24629
UniProt: A0AA86M7V2
LinkDB
Position
144817..147531
AA seq 904 aa
MSNISRVSLFATLNPIAFKSVEGATVLCKLRGNAVVELVHWVAQILQQDDSDWHHILRHF
ELDAGAVLADVQRALERQPGGAQGISDLSESITNAVERAWVYASLMFGAQKVRTGHVLLA
VLKTDFLLQELLRISPRFRQIPENLLGDRFAKMVENSPEQALQHSVLPENAVPGEASGAM
PAAQLGGEEALKRYTVDLTEKARKGEIDPVTGRGLEVRQIVDILLRRRQNNPLITGEAGV
GKTAVVEGFALQVVAGDVPPALKNVRILTLDLGLLQAGASMKGEFEQRLRQVIDEIQSSE
QSTILFIDEVHTLVGAGGNQGTGDAANLLKPALARGSLRTIGATTWAEYKKYIEKDPALT
RRFQVVQVGEPSETQGIDMLRGLAGAMQAHHRVWLLDEAVQAAVRLSHRYIPARQLPDKA
ISLLDTACARVAVSQHATPPSIECLQKQLDALGTEREAIEKETAFGREHSQRRDEIAQMT
QQLGDQLEQLQTQWAQEKRLLDSLLTLRQQVQASRQAQVEPDPVPEFNAELNTQAACADQ
QAVFEQLKALEFEIKTLQGESPMIHPQVDAQCVAAVVADWTGIPVGRMVRNEIENVLNLP
EALGSRIIGQTHALDTIARRIQTNRAGLDDPNKPVGVFMLAGTSGVGKTETALALAENLY
GGEHNVITINMSEYQEAHTVSSLKGAPPGYVGYGEGGVLTEAVRRKPYSVVLLDEVEKAH
PDVHELFFQVFDKGWMEDGEGRRIDFRNTLILLTTNVGTSVLMSLCKTGLQTGQYPASEE
LVQALRAPMLQVFPPALLGRLEVVPYYPLSSDMLASIVRLQLARIEQRISSAHKIRVTIA
PSVIERIVARCNEADSGGRMVGAILSNTVLPTISRHILQATLEGKPVTQLSIDTDGHEFT
YCYV
NT seq 2715 nt   +upstreamnt  +downstreamnt
atgagcaacatcagccgtgtttccctgtttgcaacattgaaccccatcgcattcaaatcg
gttgagggggccactgtgttgtgcaaactccgcgggaatgcggttgtggaactggtgcac
tgggttgcccagatcctgcaacaggacgacagcgactggcatcacattcttcgccatttt
gaactggatgcaggcgctgtgctggccgacgttcaacgcgcgctggaacggcagcctggt
ggtgcacagggtatttcagacctttccgagtcgattaccaatgccgtggaacgggcgtgg
gtgtacgcctcgctgatgttcggtgcacagaaggtgcgtaccgggcacgtactgctggcg
gtgttgaaaaccgattttctgttgcaggaacttctccgcatttcaccccgtttccggcaa
atccctgaaaacctgcttggcgaccggtttgcgaaaatggtcgagaactccccggagcag
gctttgcaacacagcgtactccctgaaaacgcagtgcccggtgaagccagtggtgccatg
cccgctgcgcagctgggtggtgaggaagccttgaagcgttacacagtggacctgaccgag
aaggcgagaaagggagaaatcgaccccgtcactggtcggggcctggaagtacgtcagatc
gtggatattttgctgcgccgccgccagaacaacccgctgatcaccggtgaagctggtgtg
ggtaaaaccgcggtggtcgaaggttttgccctgcaggtggtggccggtgacgtgccgccc
gccttgaagaatgtgcgcattctgacactggacctcggcttgcttcaggccggtgcctcc
atgaagggtgagttcgaacagcgcctgcgccaagtgattgacgaaatacagtccagtgaa
caaagcacgatacttttcattgacgaagtgcacacgctggtgggggccgggggcaaccag
ggcactggcgacgcagccaacctgctgaagcctgccctggcccggggcagcttgcgcacc
attggtgccaccacctgggctgaatacaaaaagtacattgaaaaagaccctgcgctgaca
cgccgctttcaggtggtgcaggtgggtgaaccatcggaaacccaaggcattgacatgttg
cgtggcctggctggggccatgcaggcccaccaccgggtgtggttgctcgacgaggcggtg
caggccgccgtgcgcctgtcacaccgctatattcccgcccgccagttgcccgacaaggcc
atcagcctgttggacactgcctgtgcgcgtgtggcagtttcacagcacgccacaccccct
tcgattgaatgcctccagaaacagctggatgccttgggcactgagcgtgaggccattgag
aaagaaactgcctttggccgtgaacattcgcaaaggcgagatgagattgcgcaaatgact
caacagttgggtgaccagcttgaacagcttcaaacccagtgggcgcaggaaaaacgtctg
ctggattcgttgctgaccttgcggcaacaggtacaggccagtaggcaggcgcaggtcgaa
cccgatcccgtaccggaattcaatgcggaattgaatacgcaagccgcttgtgccgaccaa
caggctgtatttgaacaacttaaagcactggaattcgagatcaagacgctgcaaggcgag
tcccccatgattcacccccaagtggatgcccagtgcgtggctgccgtggtggcagactgg
accgggattccggtgggccgaatggtgcgcaatgaaatcgaaaacgtgctgaatctgcct
gaagccttgggcagccgcatcatcgggcaaacccatgcactggacacaattgcccgcaga
atccagaccaaccgcgcaggtctcgatgaccccaacaagcccgtgggtgtgttcatgctc
gcgggaacatcgggcgtgggtaaaaccgaaactgccctggccctggcggaaaacctgtac
ggtggcgagcacaatgtgatcaccatcaacatgagcgaatatcaggaagcgcacacggtg
tcatccctgaaaggcgcgccacccggttatgtgggctatggcgaaggtggcgtattgacc
gaggccgttcgccgaaaaccctacagcgtggtgctgctggacgaagttgaaaaagcccac
cccgatgtgcatgagctgtttttccaggtgtttgacaaaggctggatggaagacggtgaa
gggcgtcgaatcgattttcgcaacaccctgattttactgaccaccaatgtgggtacttca
gtgctgatgtcgctgtgcaaaaccggcttgcaaactgggcagtaccctgcatccgaggaa
cttgttcaggccttgcgtgcacccatgctgcaagtgttcccacccgccttgctgggtcgt
ctggaagtggtgccgtactacccgctgtcaagcgacatgctggccagcattgtgcgcttg
caactggctcgaatcgagcagcgcatttccagcgcccacaaaatcagggtgaccattgca
ccgtctgtaattgaacgcattgtggcgcgctgcaacgaagctgattccggcgggcgaatg
gtgggggccattcttagcaataccgtgttgcccaccatcagccgtcacattcttcaggcc
acgctggaaggcaaaccggtgacccaattgagcattgacaccgatggccatgaattcacc
tactgttacgtgtaa

DBGET integrated database retrieval system