Limnobacter thiooxidans: RGQ30_02060
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Entry
RGQ30_02060 CDS
T09704
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
lto
Limnobacter thiooxidans
Brite
KEGG Orthology (KO) [BR:
lto00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lto03021
]
RGQ30_02060 (rpoH)
Transcription machinery [BR:
lto03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
RGQ30_02060 (rpoH)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
IF2_N
KORA
HTH_3
Motif
Other DBs
NCBI-ProteinID:
BET24705
UniProt:
A0AA86J5L4
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All DBs
Position
complement(217809..218738)
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AA seq
309 aa
AA seq
DB search
MTTNALTLANLRAPGNALAVRDPWALVARGPLGNLDAYISATHQIPMLTPEEEIELGERL
QRDNDLEAARRLVLSHLRLVVAVARQYLGYGLPHADLIQEGNIGLMKAVKRFDTTRGVRL
VSFALHWIKAEIHEYIIRNWRMVKMITTKAHRKLFFNLNSFKKYGQTLSPDQVNEVAAEL
NVRPEDVSDMERRMAGHEFSLDPVIDADSEETSYNPVRYLAAEGAEPSEVLEGANMERLH
SEGLDLALASLDERSQRIISSRWLAGENAKTLHDLAAELGVSAERIRQIETQAMKKMKTA
LLKYEHGEV
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
atgaccacaaatgcattaacacttgctaatcttcgcgcccccggcaacgcccttgccgtg
cgcgacccctgggcactggtggcccgtggaccgcttggcaaccttgatgcctatatttcc
gctacccaccaaatccccatgctcactcctgaagaggaaatcgagctgggtgagcgcctg
caacgcgacaacgaccttgaagctgcccgccgcttggtgcttagccacctgcgcctggtt
gtggccgtggcacgccagtacctgggttatgggttgccccacgccgacctgattcaggaa
ggcaatatcggcctgatgaaagccgtcaagcgctttgacaccacgcgcggcgtgcgcctg
gtcagctttgcgctgcactggatcaaggccgaaatccacgaatacattatccgcaactgg
cgcatggtcaaaatgatcacgaccaaggcgcaccgcaagttgtttttcaacctgaacagc
ttcaaaaaatacggccaaaccctgtcgccagatcaagtcaacgaagtggcggcagaattg
aatgtgcgccccgaggatgtttccgacatggaacgccgcatggctggccatgaattcagc
cttgacccggtgattgacgcagacagcgaagaaaccagctacaaccccgtccgctacctg
gccgctgaaggcgctgagcccagtgaagtgctggaaggtgccaatatggagcgtttgcac
agcgaggggctggacctggccttggccagcctggatgaacgcagccagcgcatcatttcc
agccgctggctggcgggcgagaatgccaaaaccctgcacgacctggccgctgagctgggt
gtatcggcagaacgcatccgccagattgaaacccaagccatgaaaaaaatgaaaactgcc
ctgcttaaatacgaacacggcgaagtttaa
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