Limnobacter thiooxidans: RGQ30_02890
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Entry
RGQ30_02890 CDS
T09704
Symbol
gmd
Name
(GenBank) GDP-mannose 4,6-dehydratase
KO
K01711
GDPmannose 4,6-dehydratase [EC:
4.2.1.47
]
Organism
lto
Limnobacter thiooxidans
Pathway
lto00051
Fructose and mannose metabolism
lto00541
Biosynthesis of various nucleotide sugars
lto01100
Metabolic pathways
lto01250
Biosynthesis of nucleotide sugars
Module
lto_M01016
GDP-L-Fuc biosynthesis, GDP-Man => GDP-L-Fuc
Brite
KEGG Orthology (KO) [BR:
lto00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00051 Fructose and mannose metabolism
RGQ30_02890 (gmd)
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
RGQ30_02890 (gmd)
Enzymes [BR:
lto01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.47 GDP-mannose 4,6-dehydratase
RGQ30_02890 (gmd)
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Motif
Pfam:
GDP_Man_Dehyd
Epimerase
RmlD_sub_bind
Polysacc_synt_2
NmrA
Glyco_transf_4
adh_short
Motif
Other DBs
NCBI-ProteinID:
BET24788
UniProt:
A0AA86IZF6
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All DBs
Position
326706..327824
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AA seq
372 aa
AA seq
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MSKVALITGVTGQDGSYLAEFLLSKGYEVHGIKRRASLFNTQRVDHIYEDPHVENARFKL
HYGDLTDSSNLTRIIQQVQPDEVYNLGAQSHVAVSFESPEYTADVDAMGTLRLLEAIRFL
GLEKKTRFYQASTSELYGLVQEIPQKETTPFYPRSPYAVAKMYAYWITVNYRESYGMYAC
NGILFNHESPRRGETFVTRKITRGMSNIAVGLEQCLYMGNMDALRDWGHAKDYVEMQWLM
LQQDTPDDFVIATGVQYSVRQFIEMTAGELGVTLRWEGTGVDEKGIVVKVEGDKAPALKE
GSVVVQVDPRYFRPAEVETLLGDPSKAKQKLGWTPKITLQEMVQEMVQVDLDAARQHALL
KQHGYSIAVSRE
NT seq
1119 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaagtggcgttaattaccggtgtaaccgggcaggatggttcgtatctggctgag
ttcctgttgagcaagggttacgaagtacatggcattaagcgccgtgcttccctgttcaat
acccagcgcgtggaccacatttacgaagacccgcatgttgaaaacgcccgtttcaaattg
cactatggtgacttgaccgacagctccaacttgacccgaattattcagcaggttcagcct
gatgaggtctacaacctgggggcacaaagccacgttgcagtgagcttcgaaagtccggaa
tacacagccgatgtggatgcgatgggtacattgcgcctgttggaggccatccgctttctg
gggttggaaaagaaaacccgtttttaccaggccagtacttccgagttgtacggcttggtt
caggaaattccgcaaaaggaaacgacacctttttacccgcgcagcccctatgccgtggca
aaaatgtacgcctactggattacggtgaactaccgcgaaagctatggcatgtatgcctgc
aacggtatcttgttcaaccatgaaagcccgcgccgtggcgaaaccttcgtaacccgaaaa
attacacgcggaatgagcaacattgccgtgggcttggagcaatgcctgtacatgggcaat
atggacgcgctgcgtgattgggggcatgcaaaagactacgtcgagatgcagtggctgatg
ctgcagcaagacacaccagacgattttgtaattgccaccggggtgcaatacagcgttcgc
cagttcatcgaaatgacggcgggtgagttgggtgtaacactgcgctgggaaggaacgggc
gtggatgagaaagggatcgtcgtgaaggtggaaggcgacaaggccccagccttgaaagaa
ggcagtgttgtagtgcaggtggacccccgttatttccgccctgcggaggtggaaacgctg
ctgggtgatccaagcaaggcgaaacagaagctgggttggacacctaagattacccttcag
gaaatggtgcaggaaatggtgcaggttgatttggatgccgcgcgccagcatgcgttgttg
aagcagcatggatacagcatcgcagtgagccgcgaatga
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