KEGG   Limnobacter thiooxidans: RGQ30_03000
Entry
RGQ30_03000       CDS       T09704                                 
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
  KO
K01710  dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
Organism
lto  Limnobacter thiooxidans
Pathway
lto00521  Streptomycin biosynthesis
lto00523  Polyketide sugar unit biosynthesis
lto00525  Acarbose and validamycin biosynthesis
lto00541  Biosynthesis of various nucleotide sugars
lto01055  Biosynthesis of vancomycin group antibiotics
lto01100  Metabolic pathways
lto01110  Biosynthesis of secondary metabolites
lto01250  Biosynthesis of nucleotide sugars
Module
lto_M00793  dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:lto00001]
 09100 Metabolism
  09107 Glycan biosynthesis and metabolism
   00541 Biosynthesis of various nucleotide sugars
    RGQ30_03000 (rfbB)
  09109 Metabolism of terpenoids and polyketides
   00523 Polyketide sugar unit biosynthesis
    RGQ30_03000 (rfbB)
   01055 Biosynthesis of vancomycin group antibiotics
    RGQ30_03000 (rfbB)
  09110 Biosynthesis of other secondary metabolites
   00521 Streptomycin biosynthesis
    RGQ30_03000 (rfbB)
   00525 Acarbose and validamycin biosynthesis
    RGQ30_03000 (rfbB)
Enzymes [BR:lto01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.1  Hydro-lyases
    4.2.1.46  dTDP-glucose 4,6-dehydratase
     RGQ30_03000 (rfbB)
SSDB
Motif
Pfam: GDP_Man_Dehyd Epimerase RmlD_sub_bind Polysacc_synt_2 NAD_binding_4 3Beta_HSD adh_short
Other DBs
NCBI-ProteinID: BET24799
UniProt: A0AA86IXD5
LinkDB
Position
336452..337480
AA seq 342 aa
MTLLVTGSAGFIGSCFVRQHFEHSDEPVVSLDALTYAGHLSTLGNVLQNPNHTFVHASIG
DVDQVRAILETHTPRAILNFAAESHVDRSILGPSAFIETNVVGTYRLLECAREFWNKLQG
TEKAGFRFLHVSTDEVYGTLAAGDAPFSETNRYEPNSPYSASKAASDHLVRAWHHTYGMP
VLTTNCSNNYGPYHFPEKLIPLCIMNALAGKPLPVYGDGQQIRDWLFVEDHTRGIRSVLE
NGAIGETYNIGGWNEKANLDVVNLICKLLDELRPRADGVSYATQIAFVTDRPGHDRRYAI
DARKIERELGWKPAETFETGIRKTVQWYLANQAWVAEVTAGR
NT seq 1029 nt   +upstreamnt  +downstreamnt
atgactttattggttaccgggtcagcgggttttattggttcgtgctttgtacggcagcac
tttgaacacagcgatgaacccgttgtcagcctggatgcgctgacctacgccggccatttg
agtacgctgggcaacgttctgcaaaacccgaatcacacattcgtgcatgcctcaatcggc
gacgtggatcaggttcgagcaattctggagacgcacaccccccgggcaattttgaatttc
gccgcagaaagccatgtagaccgttcaattcttggaccgagtgcattcattgaaaccaat
gtggtcggtacctatcgcttgctggaatgtgctcgcgaattctggaacaagctgcaaggg
accgagaaagctggttttcgttttttgcatgtcagcacggacgaagtttacggcacgctg
gcggcgggggatgctcctttttcagaaaccaaccggtacgagcccaacagcccctattca
gccagcaaagcagcaagtgatcacctggttcgagcgtggcaccacacctacggaatgcct
gtactgacgaccaattgcagcaacaattacggcccttaccactttccggaaaagctgatt
cccttgtgcatcatgaatgcgctggcgggaaagcctttgcctgtttatggcgatggccag
caaattcgtgactggttgttcgtcgaggatcacacccgcggaatccgcagcgtccttgaa
aatggcgccatcggtgaaacctacaacattggtggctggaatgagaaagccaatcttgac
gtggtaaacctgatttgcaagttgctggacgagttgcgcccgcgcgcggatggtgtgtcg
tacgccacccagattgcctttgtcaccgaccgccccgggcacgacagacgctatgcaatt
gacgcgcgaaaaattgagcgtgaattaggctggaagccagcagaaacattcgagaccggt
attcggaaaaccgtgcagtggtatttggccaatcaggcatgggtggctgaggtgacagca
gggcgttga

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