Limnobacter thiooxidans: RGQ30_04110
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Entry
RGQ30_04110 CDS
T09704
Name
(GenBank) long-chain-fatty-acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
lto
Limnobacter thiooxidans
Pathway
lto00061
Fatty acid biosynthesis
lto00071
Fatty acid degradation
lto01100
Metabolic pathways
lto01212
Fatty acid metabolism
lto02024
Quorum sensing
lto04146
Peroxisome
Module
lto_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
lto00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
RGQ30_04110
00071 Fatty acid degradation
RGQ30_04110
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
RGQ30_04110
09145 Cellular community - prokaryotes
02024 Quorum sensing
RGQ30_04110
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
lto01004
]
RGQ30_04110
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lto04147
]
RGQ30_04110
Enzymes [BR:
lto01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
RGQ30_04110
Lipid biosynthesis proteins [BR:
lto01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
RGQ30_04110
Exosome [BR:
lto04147
]
Exosomal proteins
Exosomal proteins of breast milk
RGQ30_04110
Exosomal proteins of breast cancer cells
RGQ30_04110
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Antimicrobial23
Motif
Other DBs
NCBI-ProteinID:
BET24910
UniProt:
A0AA86MDP5
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All DBs
Position
447387..449159
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AA seq
590 aa
AA seq
DB search
MSARPEDAGLNTAKVSPDQFNGFVSAEAQALFESRYWTKSYPPGVSGDMPPLRYNSMLEL
VSECLKKYADRPAFVSAGTEFSYKQVDDMSDQFAGYLKSIGVKAGDVVAIMLPNCVQFPV
CFVGAMKLGCTLTNVNPLYTVRELNHQLKDSGATTIVVFENFANTLQQSLDGTKVKNIVI
TQLGDLLGGLKGLIINFVMRKVKKMVPAYNLPQAVPMKKALAAGKGVAYPKPSPKLDDVA
LLQYTGGTTGVSKGAMLTQRNLMSNMEQGLAWMSEAIGKDPICVVTMLPLYHIYALAVNC
MLFMTFGARNILIANPRDVGTVMKVLRKEKFHVITAVNTLFNAFLNNDEFCSRDFSDMKF
AMSGGMALQQPIAERWYKVTGCAISEGFGMTETSPVVTVPPLHGGERPAFRGNVGLPIPG
TEVRLKRDDGLWAGLNEPGEICVRGPQVMLGYLNRPEETAKTIDKDGWLATGDIGTMDEQ
GYVKIVDRKKDMIIVSGFNVFPNEIEDVVAQHPGVLECGVVGVPDPVTGEKVKLVVVKKD
ASVTKEDLIAHCRQNLTGYKIPSFVEFRDDLPKTPVGKILRRELRDKPKE
NT seq
1773 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcacgtcccgaggacgcaggtttgaatactgcgaaagtatcccccgatcaattc
aatggttttgtcagcgccgaagcgcaagcgctttttgagtcccgttactggaccaagagc
tacccccccggtgtgtcaggtgacatgcctccactgcgttacaacagcatgctggaactg
gtttccgagtgtctgaagaaatacgcagaccgcccagcctttgtgtcggcaggaacagaa
ttttcatacaagcaggttgacgacatgtcagaccagtttgccggttacctgaaatccatt
ggagtgaaggctggcgacgtggtcgcgatcatgttgcccaactgcgtacagttccctgtg
tgtttcgtgggcgccatgaagctgggttgtaccctgaccaacgtgaacccactgtacacc
gtgcgtgaattgaatcaccagttgaaagattctggcgcaaccaccatcgtggtgttcgag
aattttgccaataccctgcagcagtcactcgacggcaccaaagtcaagaacatcgtgatc
acgcagctcggcgacctgttgggtggtttgaagggtttgatcatcaacttcgtgatgcgc
aaggtcaagaagatggtgccagcctacaacctaccgcaagcagtgcccatgaaaaaggca
ctggctgccggcaaaggcgtggcttacccgaagcccagccccaagctggacgatgtggcc
ctgttgcaatacacaggtggcacaacgggcgtctccaagggcgcaatgctgacccagcgc
aacctgatgagcaacatggaacaaggtttggcctggatgagcgaagccattggcaaagac
ccgatttgtgtggtcaccatgctgcctctgtatcacatctatgcgttggccgtgaattgc
atgttgttcatgactttcggtgcacggaacatcctgattgccaacccgcgtgatgtgggc
acggtgatgaaggtgctgcgcaaggaaaaattccatgtcattactgcggtgaacaccctg
ttcaacgcgttcctgaacaatgacgagttttgcagccgcgacttctccgacatgaagttc
gcaatgagcggtggcatggccttgcagcagccgatcgcagaacgctggtacaaggtgact
ggttgtgccatctccgaaggttttggcatgacagaaacctcaccggtggttactgtgccc
ccattgcatggcggcgagcgcccagccttccgtggtaacgtgggtttgccaattcctggt
accgaagtgcgcctgaagcgtgacgacggcctgtgggctggcttgaatgaaccaggcgaa
atttgcgtgcgcggcccgcaagtcatgctgggttacctgaaccgcccagaagaaactgcg
aaaaccatcgacaaggatggctggctggccaccggtgacatcggcaccatggatgagcag
ggctatgtaaaaatcgtggaccgcaagaaagacatgatcattgtgtcgggcttcaacgtg
ttccccaacgagattgaagacgtggttgctcaacaccctggcgtgctggagtgcggcgtg
gtgggcgtgcccgacccagtgactggcgagaaagtgaagctggttgtggtgaaaaaagac
gccagtgtgaccaaggaagacttgattgcgcattgccgtcaaaacctgaccggttacaaa
attccatcatttgtggaattccgcgacgatttgcctaaaacacccgttggcaagattctg
cgccgtgaattgcgcgacaaaccgaaagagtaa
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