Limnobacter thiooxidans: RGQ30_04690
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Entry
RGQ30_04690 CDS
T09704
Symbol
rsmH
Name
(GenBank) 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH
KO
K03438
16S rRNA (cytosine1402-N4)-methyltransferase [EC:
2.1.1.199
]
Organism
lto
Limnobacter thiooxidans
Brite
KEGG Orthology (KO) [BR:
lto00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lto03009
]
RGQ30_04690 (rsmH)
Enzymes [BR:
lto01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.199 16S rRNA (cytosine1402-N4)-methyltransferase
RGQ30_04690 (rsmH)
Ribosome biogenesis [BR:
lto03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
RGQ30_04690 (rsmH)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Methyltransf_5
Methyltr_RsmB-F
Methyltransf_31
Methyltransf_25
Methyltransf_24
Motif
Other DBs
NCBI-ProteinID:
BET24968
UniProt:
A0AA86IZJ3
LinkDB
All DBs
Position
520579..521553
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AA seq
324 aa
AA seq
DB search
MASTFEHIPVLLQPTVDALLHHPDGVYLDCTFGRGGHSRALLAKLSTAGRLIALDRDPQA
VQAMGQIEDARFQGVRCAFADLESALDSLGLDQVDGILMDIGVSSPQIDQADRGFSFRRD
GPLDMRMDPQTGESAADFLARAEAREIKEVIKNYGEERFAVQIAAAIVARREERAIATTL
DLAQIVAGAVRTREPGQDPATRTFQALRIHVNQELAQLEQGLTAAFKRLKVGGRLAVISF
HSLEDRITKQFIEKLANPKSQQDARLRKLPLPEPMPLMKKLERIKPTREESELNPRSRSS
VLRVAEKLAELPAASSGKRAVWAD
NT seq
975 nt
NT seq
+upstream
nt +downstream
nt
atggccagcaccttcgaacacattcccgtgcttctgcagcccacggttgatgccctgttg
catcatcctgatggtgtctatctggactgtacctttggtcgtggcggacacagccgcgca
ctgttggccaagctgtcaacagcaggtcgactgattgcccttgatcgtgatccacaggcg
gttcaagccatgggccagattgaagacgcccggtttcaaggggtgcgttgtgcttttgcg
gatctggaatctgccttggactcattgggtttggatcaggtagatggcatcttgatggac
attggcgtgtcctccccacagattgatcaagccgaccggggtttcagctttcgcagggac
ggccccctggacatgcgaatggatccacagactggagagtctgcggccgattttcttgct
cgggccgaggctcgggaaatcaaagaggtaataaaaaattatggggaagaacggtttgct
gttcagattgcagcagcgattgttgctcgccgcgaggagcgggcgatcgctacaacactc
gaccttgcccagatcgtggcaggggcagttcgcacgagggagccgggccaggaccctgca
acgcgcacctttcaggctttacggattcacgtcaaccaggagcttgcgcagctcgaacaa
ggtttaacggcagcattcaagcgcttgaaggtaggtggtcgcctggcggtcatcagtttt
cactcccttgaagaccgcattaccaagcagtttattgaaaagctggccaaccctaaatca
cagcaagatgcgcggttgaggaagttgccgttgcccgagcctatgcccttgatgaaaaag
ctggagcgaatcaagcccacgcgtgaagagtcagagttgaacccacgctcgcgttcatcc
gtgctgcgtgtggctgagaaattggccgagttgcccgccgcgtcttcgggaaagagggct
gtatgggcagactga
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