Limnobacter thiooxidans: RGQ30_04730
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Entry
RGQ30_04730 CDS
T09704
Symbol
murF
Name
(GenBank) UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase
KO
K01929
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:
6.3.2.10
]
Organism
lto
Limnobacter thiooxidans
Pathway
lto00300
Lysine biosynthesis
lto00550
Peptidoglycan biosynthesis
lto01100
Metabolic pathways
lto01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
lto00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
RGQ30_04730 (murF)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
RGQ30_04730 (murF)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
RGQ30_04730 (murF)
Enzymes [BR:
lto01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.10 UDP-N-acetylmuramoyl-tripeptide---D-alanyl-D-alanine ligase
RGQ30_04730 (murF)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
Motif
Other DBs
NCBI-ProteinID:
BET24972
UniProt:
A0AA86MHC5
LinkDB
All DBs
Position
525056..526450
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AA seq
464 aa
AA seq
DB search
MLEMNWDLNEIGDVLVGQLLEPVLSVSGSVRLVQTDSRQVAPGDLFVCLAGERFDAHDFA
SEVVQAGACALVTNRLLDVPAAQFVVKDTRVALGALASAWRHRFNIKVLAVVGSNGKTTS
KEMLGSICKSQFGADKVLVTAGNLNNDIGVPQTLLKLRDSHQVAVIEMGMNHPGEIDYLA
SLVKPDVVLLTNAQREHQEFMKTVMAVARENGSAFSHLPPEGVAVFPVSEEFESTWLDQS
TGATALRFGAGADFELQPLSLTGEKGWAVLNAAGNPITLQPTFIGEHNYANAAGAAAAAH
VAGCSAQAIQAGLENFQPVNGRLQIVLNMPSLLLINDSYNANPDSVNAASKVLAAEQGNT
LLVLGDMGEVGDQSDEYHAEVGQFARQAGVHSVYAIGEATQHTVRAFGEGAHHFNTIDQL
INQTMSTTSQGRWSVLVKGSRFMKMERVVQALVQHYTAETKHAS
NT seq
1395 nt
NT seq
+upstream
nt +downstream
nt
atgcttgagatgaattgggatctgaacgaaattggcgacgtgttggttggccagttgctt
gagcccgtactgtctgtcagcggctccgttcgtctggtgcaaactgatagcaggcaggtc
gccccaggtgacctgtttgtttgcctggctggtgagcgttttgatgcacatgattttgct
tcagaagtggttcaggccggagcgtgtgcattggttaccaaccgattgctcgatgtaccg
gctgcccagtttgtagtgaaagatacacgtgttgctttgggggccttggccagtgcgtgg
cgacatcggttcaacatcaaggtgttggcggtggtgggcagcaatggaaaaaccaccagc
aaggaaatgttgggaagcatttgcaaatcacagttcggtgccgacaaggtgttggtgacc
gcaggcaatttgaataatgacattggtgtgccgcaaaccttattgaagctgcgtgattct
catcaggtagccgtgattgaaatgggcatgaatcacccaggtgaaatcgattacctggcc
agtttggtgaagccagacgtggtccttctgaccaacgcccagcgtgagcaccaagagttc
atgaaaaccgtgatggccgtggcccgggaaaatggcagcgcgttctcacatttgccaccg
gaaggtgtagcagttttcccagtgtcagaagaatttgagtcgacctggcttgatcagtca
accggcgcaactgcattgcgttttggtgcaggcgctgatttcgaactgcagccgttaagc
ctgacgggtgaaaaaggctgggctgtcctgaatgcagcaggtaacccaattacgttgcaa
ccgacatttatcggagaacacaattacgcgaatgccgcaggcgcagctgccgcagcccat
gtggccggttgcagtgctcaggccattcaggctggtcttgagaatttccagccagtgaac
gggcgcttgcagattgtgctgaatatgccttcattgctgctgatcaatgacagttacaac
gccaatccggactctgtcaatgcagccagcaaggtgttggctgccgaacaaggaaacaca
ctgctggtgctgggcgatatgggcgaagtgggcgaccaatccgatgaataccatgcagag
gtcgggcaatttgccagacaggcgggtgtacacagcgtatatgccatcggagaggccact
caacacacagtacgtgccttcggagagggggcgcatcatttcaacacaatcgatcaattg
ataaatcaaaccatgagtactacaagtcagggccgttggtccgtgctggtgaagggctca
cgcttcatgaaaatggaacgtgttgtgcaggcgctggttcaacattacaccgcggagaca
aagcatgcttcttga
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