Limnobacter thiooxidans: RGQ30_04750
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Entry
RGQ30_04750 CDS
T09704
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
lto
Limnobacter thiooxidans
Pathway
lto00470
D-Amino acid metabolism
lto00550
Peptidoglycan biosynthesis
lto01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
lto00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
RGQ30_04750 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
RGQ30_04750 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
lto01011
]
RGQ30_04750 (murD)
Enzymes [BR:
lto01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
RGQ30_04750 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
lto01011
]
Precursor biosynthesis
Amino acid ligase
RGQ30_04750 (murD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
MurD-like_N
Mur_ligase_C
DUF2999
Motif
Other DBs
NCBI-ProteinID:
BET24974
UniProt:
A0AA86M817
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Position
527615..529093
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AA seq
492 aa
AA seq
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MLNLFRDQSVLQVGLGESGLACARWALAQGARLTVIDTRETPPGLRELQAIEPNVRLVNA
LDGLVWDFHRVVVSPGLPPSHPLMVAVLEQAGQHGTLVDSELDLFADALKALANDRGYTP
QVVGITGTNGKTTTTRMVECLARFAGKHAVAAGNISPAAMDALREQLDKNELPDLWVLEL
SSFQLHWTKRLRFDASTVLNITQDHLDWHADMQEYAGDKFRIFSENGVCVLNRDDGLVAS
APVPIESSVVTFGVSAPVKANDFGLVREGGMLWLAQLVGDQESAGTARRRKPEEIELTQK
LLMPTEALQVAGLHNASNALAALAICQGLGLPMAKLLHGLRSYQGEPHRVQHIVQIDGVD
YFDDSKGTNVGATVAALNGLAKPTVLIAGGDGKGQDFSPLVQPVAHYCKHVVLIGKDADS
LIAALEPAQVLCEKADSLEQAVQLATLKATAGDCVLLSPACASLDMFRNYVHRAEVFVEA
VKVHAADRGQPC
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atgttgaatctgtttcgtgatcaatcggtgttgcaagtcgggctcggcgagtctggactc
gcctgcgcgcgctgggcgttggcgcagggcgcacgcctgacggtcattgacacccgcgaa
acgccacccggattgcgggaattgcaggccattgagccaaacgtccgtctggtgaatgcg
cttgatggcttggtttgggattttcaccgagtggttgtgtcgccaggtttaccaccttcg
catccgctgatggttgccgtgcttgaacaggccgggcaacacggcacgctggttgattcc
gaactggatctgttcgccgatgcattgaaggctttggctaacgaccgtggttacacgcca
caggttgtgggtattaccggcaccaatggaaaaaccaccaccacacgcatggtggagtgc
ctggcccggtttgcaggaaaacatgctgttgcagcaggcaacatcagccctgcagccatg
gatgccctgcgcgagcagctggacaaaaatgagttgcctgatttgtgggtccttgagctg
tcgagtttccagttgcactggaccaagcgtcttcggtttgatgcctcaactgtgttgaac
atcacgcaggatcaccttgactggcatgcggacatgcaggaatacgctggcgacaaattc
cggattttctctgaaaacggcgtgtgcgtgctcaatcgcgatgatgggcttgtggcgagt
gcgccagtgccaatcgaatccagcgtggtgacttttggggtcagtgcgccggtgaaggcc
aatgattttggtctggtgcgtgaagggggcatgttgtggcttgcccagctggttggcgat
caggaaagcgcgggtactgcgcgtcgccgaaagccggaagaaattgaactgacccagaag
ttgctgatgcctacagaggccttgcaggtggcgggtttgcataatgcaagcaacgcactg
gccgcgctggccatttgccaggggctaggtctaccaatggcgaaactgctgcacggatta
cgcagctaccaaggcgaacctcatcgtgttcagcacatcgtgcaaattgatggtgttgat
tattttgacgacagcaaaggcaccaatgtgggcgcaacggtggcggccctgaatggtctg
gccaaacccacagtattgatcgcaggcggtgatggcaagggccaggatttttctcccctg
gtgcagcccgtggcccattactgcaaacatgttgtcttgatcggaaaagatgccgatagc
ttgatcgctgctcttgaaccggcgcaagttctttgtgaaaaagcggacagtcttgagcag
gctgttcaactggcaacactgaaagccacagcgggcgattgtgtgttgttgagcccggct
tgtgccagcctcgacatgttccgaaactatgtgcaccgagctgaggttttcgtggaagca
gtcaaggtacatgctgctgacagggggcagccatgctag
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