Limnobacter thiooxidans: RGQ30_04950
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Entry
RGQ30_04950 CDS
T09704
Symbol
pilB
Name
(GenBank) type IV-A pilus assembly ATPase PilB
KO
K02652
type IV pilus assembly protein PilB
Organism
lto
Limnobacter thiooxidans
Brite
KEGG Orthology (KO) [BR:
lto00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
lto02044
]
RGQ30_04950 (pilB)
02035 Bacterial motility proteins [BR:
lto02035
]
RGQ30_04950 (pilB)
Secretion system [BR:
lto02044
]
Type II secretion system
Pilin secretion/fimbrial assembly protein
RGQ30_04950 (pilB)
Bacterial motility proteins [BR:
lto02035
]
Pilus system
Pilus assembly proteins
RGQ30_04950 (pilB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
T2SSE
MshEN
AAA_30
AAA_11
AAA_22
AAA_16
AAA_14
AAA_7
AAA_19
nSTAND3
DEAD
AAA
HerA_C
FtsK_SpoIIIE
AAA_29
Mg_chelatase
ResIII
PAXX
Motif
Other DBs
NCBI-ProteinID:
BET24994
UniProt:
A0AA86IXL4
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Position
complement(550019..551716)
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AA seq
565 aa
AA seq
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MTISSAVVKSSGLLRALTAKGILDNLQIEQLTSEEIQGRSVADWIVNNGIVSAELLASSV
AQHFGYPLLDLSQFDDSRSGLEAELIQAEKGLEAFVLGRRQGTLSVAMADPTDLSTIQQL
KFRTQLQVEPVVVEYDKLLHRLEKSDPAHGMEEGLLTDVESETGAGGAEEQSPDVDDAPI
VRFVQRVLSEALKKGASDIHFEPYEKSYRVRFRIDGLLQETSQPPLAAKAKIAARIKIMS
RLNTTETRTPQDGRIRLTLGADERKIDFRVSTLPTLFGEKIVMRLLDSSKSLLKLEQLGF
EAEQRAAVEKALAKPHGMILVTGPTGSGKTVSLYTFLQMLNHESINISTVEDPAEINLPG
INQVNINERIGLTFAKALRALLRQDPDVIMVGEIRDLETADISIKASQTGHKVLSTLHTN
DAVSSIIRLKNMGVETFNIASSVSLIIAQRLVRKLCSCKAPHPQGIQALARTGLINQVPQ
EDWTPFCAVGCEACNGTGYAGRTGIYEVMPVSEAMQELIISGGSALDMERLARQEGVASM
SESGLAKIRLGTTSIEEILSATKTD
NT seq
1698 nt
NT seq
+upstream
nt +downstream
nt
atgaccatcagtagcgcagttgtcaaaagctcggggctgttaagggcactgacggccaaa
ggcattctggacaacctgcagattgagcaactgacgtctgaagaaatccaggggcgctcg
gtcgccgactggattgtcaacaacggcatcgtgagtgccgagctgctggccagttctgtg
gcgcaacattttggttacccactactggacctgagccagtttgacgacagccgcagcggc
cttgaagccgagttgatccaggctgaaaagggccttgaggcttttgtgctgggtcgccgg
caaggcaccctgagcgtggctatggccgaccccaccgaccttagcaccattcaacaattg
aaatttcgaacccagctgcaggttgaacccgtggttgtggaatacgacaagctgctacac
cgcttggagaaaagcgacccggcgcatggcatggaagagggtctgctgaccgatgttgaa
tcggaaacaggtgccggcggcgcagaagagcaatcgcctgatgtggacgacgctccaatt
gttcgctttgtgcagcgtgtgttgagcgaggccttgaaaaagggagcttctgacattcat
ttcgagccttatgaaaaaagctaccgggtgcgctttcgcattgacgggctgctgcaggaa
acatctcagcctccactggcagccaaggcaaaaattgccgctcgcatcaaaatcatgagc
cggttaaataccaccgaaacccgaacaccccaagacggcagaatccggctgacactgggt
gccgatgagcgaaaaatcgacttccgggtcagcacactgcccacgctgtttggcgaaaaa
attgtgatgcgtctgctcgattccagcaagtcactactgaagctggaacagctaggtttc
gaagcggaacagcgtgctgccgttgaaaaagcactggccaaaccgcatggcatgattttg
gtgacaggccccacgggcagcggcaaaacagtgtcgctgtatacatttctccaaatgttg
aaccacgagtccatcaacatcagcacggtggaagacccggcagaaatcaaccttcccggc
atcaaccaggtcaacatcaatgaacgaatcggattgacgtttgcaaaggccttgcgcgct
ttgctgcgacaggacccggatgtcatcatggtcggtgaaatacgagacctggaaactgca
gacatttcaatcaaggcctcccagactggccacaaggtgctgtccacgctgcacaccaat
gatgccgtttcttccatcatccgcctgaaaaacatgggagtggagaccttcaacattgct
tcgtcggtcagcctgatcattgcccagcgcctggtgcgcaaactctgcagctgcaaggca
cctcacccgcagggcattcaggcactggcacgcactggcctgatcaaccaggtcccccag
gaggattggacacccttctgtgcggtgggctgcgaggcctgtaatgggacaggatatgca
ggtcgaaccgggatttacgaagtcatgcccgtgtcggaggccatgcaggaattgatcatt
tctggcggatcagcgctggacatggaaagactggcccgacaggaaggcgtggccagcatg
agtgaatcaggccttgcgaaaattcgcctgggcaccaccagcattgaggaaatcctgagc
gcgacaaagaccgattaa
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