Limnobacter thiooxidans: RGQ30_05790
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Entry
RGQ30_05790 CDS
T09704
Symbol
nirB
Name
(GenBank) nitrite reductase large subunit NirB
KO
K26139
nitrite reductase [NAD(P)H] large subunit [EC:
1.7.1.4
]
Organism
lto
Limnobacter thiooxidans
Pathway
lto00910
Nitrogen metabolism
lto01100
Metabolic pathways
lto01120
Microbial metabolism in diverse environments
Module
lto_M00531
Assimilatory nitrate reduction, nitrate => ammonia
lto_M00615
Nitrate assimilation
Brite
KEGG Orthology (KO) [BR:
lto00001
]
09100 Metabolism
09102 Energy metabolism
00910 Nitrogen metabolism
RGQ30_05790 (nirB)
Enzymes [BR:
lto01000
]
1. Oxidoreductases
1.7 Acting on other nitrogenous compounds as donors
1.7.1 With NAD+ or NADP+ as acceptor
1.7.1.4 nitrite reductase [NAD(P)H]
RGQ30_05790 (nirB)
BRITE hierarchy
Motif
Pfam:
Pyr_redox_2
NIR_SIR
Fer2_BFD
Rubredoxin_C
Pyr_redox
NIR_SIR_ferr
Pyr_redox_3
NAD_binding_9
NAD_binding_7
AlaDh_PNT_C
HI0933_like
FAD_binding_3
3HCDH_N
Motif
Other DBs
NCBI-ProteinID:
BET25078
UniProt:
A0AA86MAM2
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Position
647562..650018
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AA seq
818 aa
AA seq
DB search
MLMSVKKQKLVVVGNGMAGIRVLEELIKLAPELYDITVFGAEPHPNYNRIMLSPVLAGEQ
KFEDIVLNDWDWYTSNNVTLHVGREVTEIDRVKRLVKCADGTTAEYDRLLLATGSNSFIL
PVPGSTLPGVIGYRDIADTEAMLDAAKHYKKAVVIGGGLLGLEAANGLALQGMDVSVVHL
PTWLMERQLDPTAAGLLQKSLESKGLKFLLAKNTKALHAGADGRVSTIEFTDGEIHKADL
VVMAVGIRPNDKLAASSGLHCNRGVVVSDTLQTITDPKIYSVGECASHRGVAYGLVAPLF
EQAKVCANHLAQFGIGRYEGSVTSTKLKVTGVDLFSAGNFMGGEGCEELLLSDPIGGVYK
KLIIKEDKLVGACLYGDTADGSWYFKLMREGKAVGEIRDKLMFGQNNIGDTGHEGQSQAS
KMADTDEVCGCNGVCKGTIVQAIKTKGLFTIEEVRKHTKASASCGSCTGLCEQILMSTAG
ADYSATPKTKPMCGCTDHGHQAVRDMIFKHHLLTKEEVFSTMNWRTPNGCASCRPAVNYY
LISSWPGEAVDDPQSRFINERAHANIQKDKTYSVVPRMWGGETTAAELRRIADVVDKFNI
PTVKVTGGQRIDLLGVKKEDLQAVWKDLDMPCGHAYAKGLRTVKTCVGSEWCRFGTQDST
QMGKDLEHALFKMYAPHKVKLAVSGCPRNCAESGIKDVGVIGVDSGWEIYVGGNGGIKTE
VAQFLCRVKTSDEVLAVSGAFLQLYRKEAWYLERTVHYLERVGLDHVKARVIDDVANRDA
LWAELQAALAIEEDPWHKPEQAQVDLRQFIPITLAEVV
NT seq
2457 nt
NT seq
+upstream
nt +downstream
nt
atgctgatgtccgtcaaaaaacagaaactggtggtggtaggcaacggcatggccggcata
cgggtgcttgaagagctgatcaagctcgcgcctgaactgtacgacatcacggtgtttggc
gcagaaccacatcccaattacaaccgcatcatgctgtcgcccgtgctggctggagagcag
aaattcgaagacatcgttctgaatgactgggattggtacaccagcaacaacgtgaccctg
cacgtgggtcgcgaggtcaccgagattgatcgagtaaagcgccttgtgaagtgtgccgac
ggcaccacggctgaatacgacaggttattgctggccacaggctccaattcattcatcttg
ccagtacctggttcaacattgccgggcgtgattggctaccgtgacattgcagacaccgaa
gccatgctggatgcagccaagcattacaaaaaagcagtggtgattggcggtggcctgttg
ggcctggaagcggccaacggcctggccttgcaaggcatggacgtgtcagtggtgcacctg
cccacctggctgatggagcgccagcttgaccccaccgcagcaggcctgttgcagaaaagc
cttgaaagcaaggggctgaagtttctgctggccaaaaacaccaaggccctgcatgcaggc
gccgatggacgggtttcaacaattgaattcacggatggcgaaattcacaaggctgacctg
gtggtgatggccgtgggtattcgcccgaacgacaagctggcggccagcagtggcctgcac
tgcaaccgcggcgtggtcgtcagcgacacgctgcaaaccatcactgatccaaaaatttat
tcggtaggcgaatgtgccagccaccgtggcgtggcttacggtttggtagcacctttgttt
gaacaggccaaggtgtgtgccaaccacctggcgcagttcggcattggccgttacgaaggc
tctgtcacctccaccaaactgaaagtgaccggcgtggatttgttctccgcaggcaacttc
atgggtggtgaaggctgtgaagagctgctgctttccgatcccataggtggcgtgtacaaa
aaactgatcatcaaggaagacaaattggtgggtgcctgcctgtacggcgacaccgcggac
ggttcctggtacttcaagctgatgcgtgaaggcaaggccgtgggcgaaattcgcgacaag
ttgatgtttggccagaacaacattggcgacacaggtcatgaaggccaaagccaggctagc
aaaatggctgacacagacgaggtgtgcggttgcaacggcgtgtgcaagggcaccattgtg
caggccatcaagaccaagggtttgttcaccattgaagaagtacgcaagcacaccaaagcc
agcgcaagctgtggttcttgtacaggcctgtgtgaacagatcttgatgagcacggcaggt
gcagattattccgccacgcccaaaaccaagcccatgtgcggttgcactgaccatggtcac
caggcagtgcgcgacatgattttcaagcaccacctgttgaccaaggaagaagtattttcc
accatgaactggcgtacccccaacggttgcgcaagctgccgcccggcggtgaattattac
ctgatcagttcctggcccggcgaggcggtggacgacccgcaaagccgttttatcaatgaa
cgcgcgcacgccaatattcagaaagacaaaacctattctgttgtgccccgcatgtggggc
ggggaaaccacggcagccgagttacgccgcattgcggacgtggtcgacaagttcaacatt
cccacagtgaaggtgacgggtggccagcgcattgatttgctgggtgtgaaaaaggaagat
ttgcaggccgtgtggaaagacctcgacatgccctgcggccacgcctatgccaagggcctg
cgcaccgtgaaaacctgcgtgggcagcgaatggtgccgctttggtacgcaagacagcacg
cagatgggcaaggaccttgagcacgccttgttcaagatgtacgcaccgcacaaggtcaaa
ctggccgtgtcaggctgcccgcgcaactgtgcagaaagtggcatcaaggacgtgggtgtg
atcggtgtggattccggctgggaaatttatgtcggcggcaacggcggcatcaagaccgaa
gtggcgcagtttttgtgccgtgtaaaaacatccgatgaagtgctggctgtcagcggtgca
tttttgcagctgtaccgcaaggaagcctggtacctggagcgcacggtgcattacctggag
cgcgtgggtcttgatcatgtgaaggcacgggtgattgacgatgtggccaaccgcgatgcc
ctgtgggccgagctgcaagccgccctggccattgaagaagacccgtggcacaagcctgaa
caagcgcaggttgatttgcgccagttcattcctatcacactggcggaggtggtctaa
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