Limnobacter thiooxidans: RGQ30_05860
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Entry
RGQ30_05860 CDS
T09704
Name
(GenBank) hypothetical protein
KO
K02316
DNA primase [EC:
2.7.7.101
]
Organism
lto
Limnobacter thiooxidans
Pathway
lto03030
DNA replication
Brite
KEGG Orthology (KO) [BR:
lto00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
RGQ30_05860
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lto03032
]
RGQ30_05860
Enzymes [BR:
lto01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.101 DNA primase DnaG
RGQ30_05860
DNA replication proteins [BR:
lto03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
RGQ30_05860
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNAG_N
Zn_ribbon_DnaG
Toprim_4
Toprim_2
Toprim
DnaB_bind
Toprim_3
DnaG_DnaB_bind
Motif
Other DBs
NCBI-ProteinID:
BET25085
UniProt:
A0AA86J5E1
LinkDB
All DBs
Position
656559..658427
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AA seq
622 aa
AA seq
DB search
MIPQSFIDDLLYRLDITDVVGRYVQLKAAGANLQGLCPFHNEKSPSFSVSPSKQFYHCFG
CGAHGNAVGFVMEHLGLTFPEAVENLAGSLGIDVPHEKGMDVPAEVRSEREELVELLTRA
ANYYKAQLKKSPVAIDYLKNRGLTGQVAARYGMGYAPDAYQNLEAVVDNYASNTQLDLAG
LTKISDSNRRYDAFRGRIMFPIRNAKGQVIGFGGRVLGDEKPKYLNSPETPVFSKGHEVY
GLFEARQAIHKMGYALVTEGYMDVVALAQWGFENAVATLGTAVTPDHVQKLFKQTDRLVF
AFDGDAAGQKAAWRALQACLPHVSENKRADFIFLPAEHDPDSFIRTEGPDGFDAMVAQAA
SLSEFLARYLERNYPLQQIEGSAAAISFLKPLIVQMQPTVYRSSLLRALANLLGATPMEL
SRHLGLKSRDGGGDYFSPKNKGQFPGGQQNGQQGKFGGKKFGKYKDEPLQNNWGPRPVAK
SPLLSLAARVIRAPHLVNLCDSLLELYEREKNPATEVHSFVHLLEKVRNDPNLLEARLQH
AFNDEVHQNWVNSVLKEARGLDDSLDFETELRSGMYQCSELWFKAELERLTAEMPTQGEQ
LRWYHECMQRFQELKQKRVNQL
NT seq
1869 nt
NT seq
+upstream
nt +downstream
nt
atgattcctcaaagctttattgatgatttgctgtatcgcctggacatcaccgatgtggtg
ggccggtacgtgcaactcaaggctgccggtgcgaatttgcagggcttgtgtccattccac
aacgaaaaatctccgtctttcagcgttagcccgtctaaacagttctatcactgctttggc
tgtggtgctcatggcaacgccgttggttttgtgatggaacatctggggctgacttttcct
gaagcggtggaaaacctggctggaagcctgggtattgatgtacctcatgaaaaaggcatg
gatgtgcctgctgaagtgcgttccgagcgcgaggaactggttgaattgctgacacgcgcc
gcgaactattacaaagcgcagctcaaaaaaagcccggtcgccatcgactacctgaaaaat
aggggcctgaccggtcaggtggcggctcgctacggcatgggctatgcccccgacgcctat
cagaatctggaggccgtggttgacaactacgccagcaacacccagttggacctggcgggt
ttgaccaagatcagcgacagcaaccgccggtacgatgcatttcgcgggcgtatcatgttc
ccgatccgcaatgccaaagggcaggttattggctttggtggccgggtattgggcgacgag
aagcccaaatacctgaacagcccggaaacacccgtgttttcaaaaggccatgaagtgtac
ggtttgtttgaagctcgtcaggccatacacaagatgggctatgccttggtgaccgagggt
tacatggacgtggtggcccttgcgcagtgggggttcgagaatgccgtggccaccttgggt
actgctgttacacccgaccatgtgcagaaactgttcaagcaaaccgaccggcttgtattt
gcgtttgatggcgatgctgcgggccaaaaggccgcctggcgggctttgcaggcctgtctg
ccccacgtcagcgaaaacaagcgcgccgatttcatttttctgcctgccgagcacgatccc
gattccttcattcggacggaaggccccgatggctttgatgccatggtggcgcaggccgcg
tccctttccgagtttttggcgcgatatctggagcgaaactacccgcttcaacaaattgaa
ggcagtgctgcggctatttcatttttgaaaccccttattgtacaaatgcagcccacggtt
tacaggtcgtcgcttttgcgtgctctggccaatttgctgggtgcgacccccatggaattg
agccggcatttggggctaaaaagccgcgatggcggtggcgactatttttcaccgaaaaac
aaggggcaatttccgggtggtcagcaaaacgggcagcagggcaagtttgggggaaaaaag
tttgggaaatacaaagatgaaccgttgcaaaacaattgggggcccaggcccgtcgcaaag
tcgccactgttgagcctggctgcccgggttattcgtgcgccgcacctggtgaatttgtgc
gattccctgctggaattgtatgaaagagagaaaaacccggctacagaagtacacagtttt
gtgcatttgcttgaaaaagtcagaaatgaccccaacttactcgaagcccgtctacaacat
gctttcaacgacgaagtgcatcagaattgggtcaactccgtgctgaaagaggcacgcggt
ctggatgattctctcgattttgaaaccgagttgcgttccgggatgtatcaatgcagtgag
ctttggtttaaagccgaactggagcgccttactgccgaaatgcccacccaaggggagcaa
cttcggtggtatcacgagtgcatgcaacgcttccaagaattgaaacaaaagcgagttaat
cagttataa
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