Limnobacter thiooxidans: RGQ30_06670
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Entry
RGQ30_06670 CDS
T09704
Name
(GenBank) PAS domain S-box protein
KO
K11711
two-component system, LuxR family, sensor histidine kinase DctS [EC:
2.7.13.3
]
Organism
lto
Limnobacter thiooxidans
Pathway
lto02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
lto00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
RGQ30_06670
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
lto01001
]
RGQ30_06670
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
lto02022
]
RGQ30_06670
Enzymes [BR:
lto01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.13 Protein-histidine kinases
2.7.13.3 histidine kinase
RGQ30_06670
Protein kinases [BR:
lto01001
]
Histidine kinases
LuxR family [OT]
RGQ30_06670
Two-component system [BR:
lto02022
]
LuxR family
DctS-DctR (C4-dicarboxylate transport)
RGQ30_06670
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HATPase_c
PAS_4
PAS
PAS_9
HisKA
PAS_8
HATPase_c_3
PAS_3
HATPase_c_2
PAS_7
stn_TNFRSF12A
Motif
Other DBs
NCBI-ProteinID:
BET25166
UniProt:
A0AA86MCQ9
LinkDB
All DBs
Position
746059..748050
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AA seq
663 aa
AA seq
DB search
MQVFAPHEPNLKKIKRRQAVRFGVPVLVFSLLMALLVAAVYYAQQDERDENQAKLIADAL
WARQNIQFQVGGLINSLEALTNDPVLYPSSRMASSLNQLGRSSGELVAVFRGRELSPLVN
IEEAFDEYDLEAVRQLISGAALQRVDSSLDGLVGPFLFRGRNYVVNVSIGQRGNAVTASL
IDLDLMLERELPWWFAQDNQVELLDASGATLSRLIKASPGAGVYMHTTSLELGGLQFQLR
VNSIQEGPRLFNYGITGALAFLLLLLLLSFVMLWRDSRRRLEIEARLEEEKLFRQSMQDS
MAVGLRVWDLEGVIRYVNPAFCNMVGYKPDELIGVPQPLPYWPRKSTEEYKRLVADVISG
NAPPEGFETVYQHKNGKLIDVLIVEAPLKDVRGSHTGWMSSVIDITDRKRSESLIAEQRE
KLQSASRFALVGEVASNIAHELNQPLATMVSYAQAGMNLSQRGGNVETYAQLFEKLRDQA
QRAGRVVGSVQNLVRKRRPTRENVRVSDLIDSIRFMVNSTAMLHQVRLHFDIGTPNFDLY
IDRIMVEQALVNLVKNASEAFTASQRIRNVWIKTRLLDHSFEFSVRDDGPGLSLNNAEKM
FEALVSTKPDGLGLGLSLCRSVAESHGGRLKAEAVPTGGTCFTMDLPMAIKESMDGEQSV
GAS
NT seq
1992 nt
NT seq
+upstream
nt +downstream
nt
atgcaagtattcgccccacacgagcccaatctcaagaaaatcaagcgcagacaggctgtg
cgtttcggcgtacctgtactcgtcttttccctgttgatggctctgttggtggcggcagtg
tactacgcccagcaagacgagcgtgacgaaaaccaggcaaagctgattgcagacgcgctt
tgggctcgccaaaacatccagttccaggtgggtgggttaatcaattcgcttgaagcgctc
acgaacgacccagtgctttatccctccagccgcatggcatccagcctcaatcaactgggg
cgcagctctggcgaattggtggccgtatttcgcggtcgagaattgtcacccttggtcaat
attgaagaagcatttgacgagtacgatctcgaagcggttcgtcagctgatttccggtgcg
gctcttcaaagggtggattctagtctggacggcttggtcgggccgtttctgtttcggggc
cgaaactacgtggttaacgtcagcattggtcagcgtggcaatgcagtaaccgcgagtctt
atcgacctggacttgatgctggagcgtgaattgccttggtggttcgcccaggacaaccag
gtggagctgctcgatgcaagcggggctacgctttcacgcctgatcaaggccagccccggg
gcgggtgtgtacatgcacaccacctcgctggaactcggtgggcttcaatttcaactcagg
gtcaacagcattcaggaaggaccccgtttgttcaattacggcatcactggcgctttggcc
ttcttgctgttgcttttgttgctcagtttcgtgatgctgtggcgcgattcccggcgccgt
ctcgaaatcgaggcgcgtctggaagaagaaaagctgttccggcagtccatgcaggactcc
atggctgtggggttgcgggtctgggatctcgaaggggttatccgttacgtcaacccggcc
ttttgtaacatggtggggtacaaaccagacgagttgatcggtgtgccccagcccttgccc
tattggccccgtaaaagtactgaagaatacaagcgccttgtggcagacgtcatttccggc
aatgctccacccgaaggttttgaaacggtatatcagcacaaaaatggcaagttgattgat
gtgctgattgtggaggccccactgaaagatgtccgcggcagccacaccggctggatgagt
tccgtgattgacatcacggaccgcaagcgttcggaatcactgattgcagaacaaagggaa
aagctgcagtcggcttcacggtttgcactggtgggcgaagtggcctccaacattgcccat
gaattgaatcagccgcttgcaaccatggtgtcttacgcgcaggccggcatgaatctgagc
cagcgggggggcaatgtggaaacctatgcccagttgtttgagaagttgcgggatcaagcc
cagcgtgccgggcgcgtggtgggttcggtgcagaaccttgtccggaaacgtcggcccacc
cgggagaatgtgcgggtctctgatctcattgactccattcggttcatggtcaattccacg
gccatgttgcaccaggtgcgcttgcactttgacatcggcacgcccaattttgatttgtac
attgaccgcatcatggtcgagcaggctttggtgaatctggtcaagaacgcttcagaggcc
ttcactgcttcgcagcgcattcgcaatgtctggatcaagacccgattgctggaccactct
ttcgagttttcagtgcgtgacgacggccccggtttaagcctcaacaacgcggaaaaaatg
tttgaagccctggtgtctacaaaacccgatggcttgggcctggggttaagtctttgccga
tccgtggccgagtcacatggcgggcgtttgaaagcagaggctgtgcccaccgggggtacc
tgctttacaatggacctgccgatggcaatcaaagaatccatggatggggagcagtcagtt
ggagcaagctaa
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