Limnobacter thiooxidans: RGQ30_07430
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Entry
RGQ30_07430 CDS
T09704
Symbol
pcnB
Name
(GenBank) polynucleotide adenylyltransferase PcnB
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
lto
Limnobacter thiooxidans
Pathway
lto03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lto00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
RGQ30_07430 (pcnB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lto03019
]
RGQ30_07430 (pcnB)
Enzymes [BR:
lto01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
RGQ30_07430 (pcnB)
Messenger RNA biogenesis [BR:
lto03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
RGQ30_07430 (pcnB)
BRITE hierarchy
Motif
Pfam:
PolyA_pol_arg_C
PolyA_pol
PolyA_pol_RNAbd
DUF2204
Motif
Other DBs
NCBI-ProteinID:
BET25242
UniProt:
A0AA86MHL0
LinkDB
All DBs
Position
complement(830049..831506)
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AA seq
485 aa
AA seq
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MIKKLFKRMFSKPVTLGREAPGPAAHLNLGTPKKVKASYGVHKPKVWSVAEHKIDKRLVS
HNAIRVCETLQSKGYKAFVVGGAVRDLLLGMRPKDFDVATDASPEQTQRLFRRARVIGRR
FQIVHVMFGPETIETSTFRALASASNEKDEHGRVLRDNEFGRQDEDASRRDFTVNAMYYD
PSTETVWDYHHGMEDLRARLLRMIGEPSLRYREDPVRMLRVVRFAAKLDFNIEPATYAPI
AEMADLLRNVPASRLFDEMLKLLMSGSALACLKGLRKAGLHHGVFPLLDAILEHERGEPF
LTEALARTDQRVKDGKPLSPGFLFACLLWHLVLESWETKLEQGELKFPALFAAMDEVLAE
QAERTAIPRRLTGDMREIWAFQPRFEKRAGKAPFRMLEQQKFRASLDFYELRAKVGDVDA
DTELAEWWREFSDGDANNRQSMLDGLRGTPAGQEGAARKKKRRRKPKSRPTGQGGGSTEQ
GSSGE
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atgatcaaaaaactattcaaacgcatgttttcaaaaccggtcacgctggggcgtgaggct
cctggacctgctgcgcacttgaacctgggtacacccaaaaaagtcaaggcgagctatggt
gtccacaaaccaaaagtatggagtgtagccgaacacaaaatagacaagcgattggtcagt
cacaatgccattcgtgtttgcgagaccctgcaaagcaagggctacaaggccttcgtggtg
gggggtgcggtgcgtgacctgctgttgggcatgcgccccaaagactttgacgtggccacc
gacgccagcccggaacaaacccaacgtttgttccgccgggcccgtgtgattggccgacgt
ttccagattgtccatgtgatgtttggcccggaaacgattgaaacctccacatttcgtgca
ctggccagcgccagcaatgaaaaagatgaacatggccgtgtgctgcgcgacaacgaattt
ggtcgccaggatgaagatgcatcccgcagggactttaccgtcaatgccatgtactacgac
cccagcacggaaaccgtgtgggattaccaccatggcatggaagacctgcgcgcccggttg
ctgcgcatgatcggtgaacccagcttgcgctaccgcgaagacccggtgcgcatgctgcgc
gtggtgcgttttgcagccaaactggatttcaacattgagccggctacttacgcgccaatc
gctgaaatggctgatttgttgcgcaacgtgcctgcatcccggctgtttgatgaaatgctc
aagctcttgatgagtgggtccgccctggcttgcctgaaaggcctgcgcaaagcgggtttg
caccacggcgtgtttccattgctggatgcgatcctggaacacgagcgaggtgaacccttc
ctgaccgaagcgctggcacgaaccgatcagcgtgtgaaagacggaaagcccttgagcccc
ggatttttgtttgcctgcctgctgtggcacctggtgctggaaagctgggaaaccaagctg
gagcaaggtgaactcaaattccctgccctgtttgccgccatggatgaagtgctggctgag
caggccgagcgcacagccattccccgccgcctgactggcgacatgcgggaaatctgggcg
ttccagccccgttttgaaaagcgggcgggcaaagcgcccttccgcatgcttgaacagcag
aaattccgcgcatcgcttgatttttatgaattgcgcgccaaagtgggtgatgtagatgcg
gacactgaactggccgaatggtggcgtgaattcagtgacggtgacgccaacaaccgccag
agcatgcttgatggcttgcggggcacacccgcgggccaggaaggtgccgcacgcaagaaa
aaacgccgcagaaagccgaagagtagacccacaggccaaggtggcgggtcaactgagcag
ggatcgtctggcgagtga
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