Limnobacter thiooxidans: RGQ30_07910
Help
Entry
RGQ30_07910 CDS
T09704
Name
(GenBank) TlyA family rRNA (cytidine-2'-O)-methyltransferase
KO
K06442
23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:
2.1.1.226
2.1.1.227
]
Organism
lto
Limnobacter thiooxidans
Brite
KEGG Orthology (KO) [BR:
lto00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lto03009
]
RGQ30_07910
Enzymes [BR:
lto01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.226 23S rRNA (cytidine1920-2'-O)-methyltransferase
RGQ30_07910
2.1.1.227 16S rRNA (cytidine1409-2'-O)-methyltransferase
RGQ30_07910
Ribosome biogenesis [BR:
lto03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
RGQ30_07910
23S rRNA modification factors
RGQ30_07910
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FtsJ
S4
SYY_C-terminal
Motif
Other DBs
NCBI-ProteinID:
BET25290
UniProt:
A0AA86J6H5
LinkDB
All DBs
Position
complement(878738..879535)
Genome browser
AA seq
265 aa
AA seq
DB search
MRADLALVDKGLCPSRAQAQTLIEQGKVLLRNGVNTLPVVVKKASQRIEPFMTLELIPCD
GPNFVSRGGLKLHHALEHTHIEVENKKCIDLGQSTGGFTDCLLQHAARSVVGVDVGKDQL
HPNLKENKQVLALEGINLYKVNAGELQAEIQSREPYFLPFELAVADLSFISLRKVLPNVT
ELLPDTCEVLFLVKPQFELGPEHIGKNGLVKNLESLIGTLEDDIRNTCANLNLQVIDFFP
CALKGGDGNQEYFVHAVKKDTAAKQ
NT seq
798 nt
NT seq
+upstream
nt +downstream
nt
ttgcgcgcagacctggccctggttgacaaaggcctgtgcccatcaagggcacaggcacaa
actttgatcgaacaaggcaaggtactgcttcgcaacggtgtgaataccctgcctgttgtt
gttaaaaaagcatcgcagcggattgagcccttcatgacgctggaattgattccctgcgat
ggccccaatttcgtttcccgaggtggactcaaactacaccatgctctggaacatacccat
attgaagtagaaaataaaaagtgtattgaccttggtcagtccactggcggttttaccgat
tgcttgctccagcacgctgcgcgaagtgtggttggtgtggatgtgggcaaagaccaactg
cacccaaacttgaaagaaaacaagcaggttttagccttggaaggcatcaatctgtacaag
gtgaacgctggcgaattgcaggctgagattcagtcgagagaaccgtatttcctgccattc
gaattggcagtggcggatttgtctttcatttccctgcgcaaggtgttgccgaatgtgact
gaattactgcccgacacgtgcgaggtgcttttcttggttaaaccgcagtttgagctaggc
ccggagcacattggcaagaacggattggtgaagaacctggaaagcctgatcggtacacta
gaagacgatataagaaacacgtgcgccaatttgaacttgcaggtgattgacttctttccc
tgtgccttgaaaggcggtgatggcaatcaagaatattttgtgcatgcagtaaaaaaagac
actgctgcgaaacaataa
DBGET
integrated database retrieval system
