Limnobacter thiooxidans: RGQ30_08310
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Entry
RGQ30_08310 CDS
T09704
Symbol
gyrA
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
lto
Limnobacter thiooxidans
Brite
KEGG Orthology (KO) [BR:
lto00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lto03032
]
RGQ30_08310 (gyrA)
03400 DNA repair and recombination proteins [BR:
lto03400
]
RGQ30_08310 (gyrA)
Enzymes [BR:
lto01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
RGQ30_08310 (gyrA)
DNA replication proteins [BR:
lto03032
]
Prokaryotic type
DNA Topoisomerases
RGQ30_08310 (gyrA)
DNA repair and recombination proteins [BR:
lto03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
RGQ30_08310 (gyrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
AF0941-like
Motif
Other DBs
NCBI-ProteinID:
BET25330
UniProt:
A0AA86ME05
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All DBs
Position
928857..931493
Genome browser
AA seq
878 aa
AA seq
DB search
MDSFAKETLPISLEEEMRRSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHELNNDWN
RAYKKSARIVGDVIGKYHPHGDSAVYDTIVRMAQDFSLRYMLVDGQGNFGSIDGDNAAAM
RYTEIRLAKIAHEMLLDIDKETVDFGPNYDGSEREPKVLPARLPNLLVNGSSGIAVGMAT
NMPPHNLKEVVAACLFAIDNPECTVDDLIELIPAPDFPTAGIIYGIQGVREGYRTGRGRV
VMRAKTHFEDLERGNRVAIIVDELPYQVNKKSLLERIAELVSEKKMEGISDLRDESDKDG
IRVVIELKRGEVPEVVLNNLYKNTQLQDTFGINMVALVDSQPRLLNLRDLIFYFLRHRRE
VITRRTVFELRKARDRGHVLEGLAVALANIDEFIAIIKAAPTPPVAKADLLARGWDSSLV
REMLSRTELTASGGAKAFRPEGLPARLGLQDDGLYRLSEDQAQEILQMRLQRLTGLEQDK
IINEYKDVIDQIADLLDILSKPERINQIIKDELTSIGNEFSDERRSQIEFNATELGTEDL
ITPQDMVVTLSHSGYIKSQPLTEYRAQKRGGRGKQAATTKEDDWIDYLFVANTHDTILYF
SNAGRVYWLKVYEVPQGSRTSRGRPIINMFPLAEGEKITAVLPVKSFEDEDKYVFMATSL
GTVKKSKLSDFSRPMKRGIIAVNLDEGDYLIGAAMTNGNNDVMLFSDSGKAVRFDENDVR
AMGRSARGVRGMNLEDGQSVIAMLVAENEQQSVLTATQNGYGKRTPVAEYTRHGRGTKGM
IAIQTSERNGKVVSAVLVNPTDEIMLITTGGVLVRTRVSEIREMGRATQGVTLINVDEGT
WLSGLQRIVESDAEDVVDVEDIEASSESDSGEAPATEE
NT seq
2637 nt
NT seq
+upstream
nt +downstream
nt
atggattcattcgcaaaagaaacactcccgatcagtctagaggaggaaatgcgcaggtcc
tacctcgattacgccatgagcgtgatcgttgggcgtgccctgccagacgtgcgggacggc
ttgaaacccgttcaccgtcgagttttgtttgcgatgcatgaactgaacaacgactggaac
cgagcctacaagaaatcagcccgtatcgtcggtgacgtgatcggtaagtaccacccgcac
ggcgattctgcggtatatgacacgattgtccgcatggcgcaggacttttccctgcgttac
atgctggttgatggacagggtaacttcggttcgatcgacggcgacaacgctgcagcgatg
cgatacaccgaaattcgtctggccaaaatcgcccacgaaatgctgctcgatatcgacaag
gagactgttgattttggcccgaactatgacggcagcgaacgcgagcccaaggtgttgccc
gcccgtttacccaacttgctggtcaacggttcgtcaggtattgcggtgggcatggccacc
aacatgccgccacacaacctcaaggaagttgttgctgcctgcctgtttgcaattgacaac
cctgaatgcacagtcgatgacctgatcgagttgattcctgctcctgacttccctactgcc
ggcattatttacggcattcaaggagttcgagaaggctaccgcaccggccgcggccgtgtg
gtcatgcgggcaaaaacccacttcgaagaccttgagcgcggcaaccgcgtggcaattatt
gttgatgagctaccctaccaggtgaacaagaaaagcctgcttgagcgaattgccgagctg
gtttctgaaaagaaaatggaaggcatttccgatttgcgcgacgagtccgacaaagacggt
attcgcgtcgtcatcgaactcaagcgcggtgaagtgcctgaagtggtgttgaataacctg
tacaaaaacacacaattgcaggacaccttcggcatcaacatggtggcattggtagacagc
cagccccgtttgctgaacctgcgcgacctgattttctacttcctgcgccatcgccgggaa
gtcatcacccgtcgcacggtattcgagttgcgcaaggcccgcgaccgcggccatgtgctc
gaaggtttggcggtggctttggccaacattgacgaattcattgccattatcaaggcggca
cctacgcctcctgtggccaaggccgatttgctggcccgtggctgggattcctccttggtg
cgtgaaatgctgtcgcgcactgaactgactgcttcaggtggtgcaaaggcattccgtccc
gaaggtttgccggcacgtcttggtttgcaagatgacggtctgtaccgtctcagcgaagac
caggctcaggaaattctccagatgcgcctgcaacgcctgactggccttgagcaagacaaa
atcatcaatgaatacaaagacgtcattgaccagatcgcggacctgttggatatcttgtcc
aagcctgagcggatcaaccagatcatcaaagatgagttgacttcaattggtaacgagttt
tcagacgagcgccgttcgcagatcgaattcaacgcgaccgaattgggtacggaagatctg
atcacgcctcaggacatggtggtgactctgtcccattctggctatatcaagagccagccg
ctgactgaataccgcgcacagaaacggggtggacggggcaagcaggctgccaccaccaaa
gaagacgactggattgattacctgtttgtggcgaacacccacgacaccattttgtacttc
agcaatgcggggcgtgtgtactggctcaaagtgtatgaagtgccacagggttcacgcacc
tcgcgcggccggccaatcatcaacatgttccccttggcggaaggcgaaaaaatcaccgcc
gtgttgccagtaaaaagttttgaggatgaggacaaatacgtgttcatggccaccagcctg
ggcacggtcaagaaatccaagctgagcgatttctcccgccccatgaagcgcggcattatc
gccgtgaacctggatgaaggcgattacctaatcggcgctgccatgaccaatggcaacaac
gatgtgatgctgttcagcgattcaggcaaagcggtgcgttttgacgagaacgatgtccga
gccatgggtcgaagtgcccgcggtgtgcgcggcatgaatctggaagacgggcaaagtgtc
attgccatgctggttgctgaaaacgaacagcagtccgtgttgacagccactcaaaatggt
tacggcaagcgcacgccggttgcggaatacacccgccatggccgtggaaccaagggcatg
atcgccatccagacctccgagcgcaatggcaaggtggtttctgcggtgttggtgaacccg
actgatgaaatcatgttgatcaccaccggcggtgtgctggtgcgcacacgtgtgtctgaa
attcgcgaaatgggccgcgccacccagggcgttaccttaatcaatgtggatgaaggcacc
tggctttcaggcttgcagcgcattgttgaatcggatgctgaagacgtggtcgatgtcgaa
gacatcgaagcgagtagcgagagtgattcgggtgaagcaccggccaccgaagaataa
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