Limnobacter thiooxidans: RGQ30_09290
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Entry
RGQ30_09290 CDS
T09704
Name
(GenBank) hypothetical protein
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
lto
Limnobacter thiooxidans
Brite
KEGG Orthology (KO) [BR:
lto00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lto03000
]
RGQ30_09290
Transcription factors [BR:
lto03000
]
Prokaryotic type
Helix-turn-helix
Other families
RGQ30_09290
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
AAA_lid_14
HTH_8
GAF
HTH_30
AAA_5
HTH_Tnp_ISL3
AAA_2
HTH_23
Mg_chelatase
AAA
HTH_22
HTH_29
HTH_28
HTH_17
HTH_AsnC-type
IstB_IS21
HTH_psq
AAA_7
NB-ARC
AAA_3
nSTAND6
NUMOD1
HTH_7
TrmB
HTH_24
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
BET25428
UniProt:
A0AA86IY58
LinkDB
All DBs
Position
complement(1034500..1036941)
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AA seq
813 aa
AA seq
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MTFLSERDSGSIASNAQVLELIDPGTEGHLEFIRRAHQRSTAAGLDTTAKVDIAPPAGNT
LKELIEKNNRLKSCALPFMETLYEQVVNTHSMVLLTDASGTIIESLGDDDFLVKAQKVAL
APGVTWSEEHKGTNAIGTALIEELPTVVHGQDHFLDVNRFLTCSAAPIFDPNGVAIGVLD
VTGDYRSYHRHTMGLVRMSAQMIENHLFNSSFQDAIIVQFHQRGEFLGSVVEGAAAFSPG
GKFLAANRAAMVQFGMSSNALKSHTFSSLFGMPLSALIDHYRTCNPIPLILCLHNGNQVT
AKASLGSVGRGRIFDSVGLVKNNADAAVVQNQAPATQKANTTCQKSRHLSSLKYLNTGDN
QVARIIDKVCKVIDKDIPILILGETGTGKEILAQAIHNDSPRQDKPFVAVNCASIPETLI
ESELFGYEDGAFTGAKKKGSQGRILQANGGTLFLDEIGDMPISLQARLLRVLQERVVTPL
GSQKSIPVNLQVICATHRNLRDQITAGLFREDLYYRLHGLVVRLPALRERTDLEKIIQRI
LENESHNPRIQVSAEVMNAFTTHSWPGNIRQLTNILRTASVMTDEHEMIEWDHLPDDFLD
EWRALRLDQQSTREAPSCAPVAPVEKHTPQVAQPARPQFNVRSNFSTETKGSGFQTKAVP
ASHAQQRNTGKANHSMFDVQVHRGQNTSAPARPVQQKANGLDQTFNKFREGRFDSWQSPA
KTVGRDDFGSTTAQPPHRFKEDGFDARPYDARSQGYLGSRQAARTPVENPINLDDLESKA
IQEALENCRGNVSAAARMLGISRNTIYRRLNSK
NT seq
2442 nt
NT seq
+upstream
nt +downstream
nt
atgacatttttatccgagcgggacagcggcagcatcgcgtccaatgcccaggtactggaa
ctgattgaccccggcacagaggggcatcttgaatttattcgcagggcccaccagcgttca
accgcagccggccttgacactacagccaaagttgacattgccccccctgcaggaaacacg
ctcaaagaactgatcgaaaaaaacaatcgattgaaatcttgcgcgctccctttcatggag
acgctgtacgagcaagtggtcaatacacacagcatggttctgctgaccgatgccagcgga
accatcattgaatccctcggagacgacgactttctggtcaaggcccagaaagttgccttg
gcgcctggcgttacctggagcgaagagcacaagggcacgaatgcgattggcactgccctg
attgaggaattgcccacggtggttcacggtcaggatcactttctggatgtgaaccgtttt
ctgacctgctctgctgcaccgattttcgatccgaacggtgtcgccattggtgtactggat
gtgacaggcgattaccgcagctaccaccgccacaccatgggcctggtgcgcatgtcggcg
caaatgattgaaaaccatttgttcaacagctcctttcaagacgcaattattgtccagttt
caccagcgcggagagttcttgggctctgtggtggaaggtgctgcggcgttttctccagga
ggcaagtttctcgcagccaacagggcggccatggtccagtttggcatgtccagcaacgca
ctgaaaagccacaccttcagctcgcttttcggcatgcctttgtcggcactgattgaccat
taccgaacttgcaaccctatccccctgattctctgcctgcacaatggcaaccaggtaacc
gccaaggcaagccttggcagcgtgggccgtggccgcatattcgactcagtgggcctggtc
aaaaacaatgccgacgctgcggtggttcaaaaccaggcgccagctacacaaaaagccaac
accacgtgccaaaaaagccgccacctttccagcttgaagtacctgaacactggtgacaac
caggtcgcccgaattattgacaaggtgtgcaaggtcattgacaaggatatccccatcctg
attttgggagaaaccggaactggcaaggaaattctggcgcaggccattcacaacgattcg
ccacggcaagacaaaccgtttgtggctgtgaattgcgcatccatcccggaaacgctgatt
gaatctgaattgttcggttatgaagacggtgcctttacgggtgcgaagaaaaaaggttca
caaggccgaattctgcaagccaatggcggcacattgtttctggatgaaattggtgacatg
ccaatttcgctgcaggcccgtttgctgcgggttttgcaggagcgggtggtcacgcccctg
ggcagccaaaagagtattcctgtcaatttgcaggtgatttgtgcaacgcacagaaacctg
cgcgaccagattaccgccggacttttccgcgaagacttgtattaccggctacatggcttg
gtggttcgtctaccggcacttcgtgaacgcactgaccttgaaaaaatcattcagcgcatc
ctggaaaacgaatcacacaacccacgtattcaggtgtcggctgaagtaatgaatgcattc
accacgcacagttggcccggcaatattcgacagttgaccaacattctgcgcacggccagc
gtgatgacggacgagcacgaaatgatcgaatgggatcacctccccgacgactttctggac
gagtggcgcgccttgcgactggaccagcaaagtacgcgtgaggcccctagctgcgcaccg
gttgctcctgttgagaagcacacaccgcaagtggctcaacccgcacggccgcaattcaat
gttcggagcaatttttccaccgagaccaaaggaagcggctttcaaacgaaagctgttcct
gcaagtcacgcccagcaaagaaacaccggcaaggcaaatcacagcatgttcgatgttcag
gtgcatcgaggtcaaaacacatcggctcccgcaagacctgttcagcaaaaagcaaacgga
ctcgatcagactttcaacaagttcagggaaggacgttttgattcctggcaaagcccggca
aaaacagttggccgggacgacttcgggtcaaccactgcgcagcctcctcaccgtttcaag
gaggatggttttgatgcacggccttacgacgcccgttcacaaggctatcttggatcaaga
caggctgcccgtaccccggtggagaacccaatcaacctagacgacctggagtccaaagcg
attcaggaagcactggaaaactgtcggggcaacgtcagcgctgccgcccgaatgctgggt
atttcaagaaacacaatctaccgacgtttgaactccaagtaa
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