Limnobacter thiooxidans: RGQ30_10270
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Entry
RGQ30_10270 CDS
T09704
Name
(GenBank) DUF853 domain-containing protein
KO
K06915
DNA double-strand break repair helicase HerA and related ATPase
Organism
lto
Limnobacter thiooxidans
Brite
KEGG Orthology (KO) [BR:
lto00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lto03400
]
RGQ30_10270
DNA repair and recombination proteins [BR:
lto03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Archaeal homologous recombinant proteins
RGQ30_10270
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HerA_C
DUF87
AAA_10
AAA_22
FtsK_SpoIIIE
TrwB_AAD_bind
ResIII
AAA_30
T2SSE
AAA_16
nSTAND3
CbiA
AAA
AAA_19
AAA_7
AAA_28
AAA_18
Motif
Other DBs
NCBI-ProteinID:
BET25526
UniProt:
A0AA86MD21
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All DBs
Position
1135519..1137057
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AA seq
512 aa
AA seq
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MIAPFPIARDNRAESATDLVMLPQLANRHGLITGATGTGKTVTLQVLAEAFSRMGTPVFM
ADVKGDLTGISQPGQSSPKFEERLKTTGIPVPEFAGSPVTLWDVFGKQGHPVRATISDLG
PLLLGRLLGLNDTQEGLLNLVFKIADDNGMLLLDLKDLRAMLQHVGENAKEFTTEYGNIS
AASVGAIQRGLLALEGQGADQFFGEPMLNIDDMMQTDSNGRGVVNILAASQLMNSPKLYA
TFLLWLLSELFENLPEVGDVDKPKMVFFFDEAHLLFTDAPKPLIEKVELVVRLIRSKGVG
VYFVTQNPLDVPDSVLGQLGNRVQHALRAFTPRDQKAVKVAAETMRPNPGLDIEASITEL
AVGEALVSFLDPKGTPSPTCRAWVYPPASKFGPATPEQCKTLIANSLVAGVYEQTVDRES
AFEMLKAHTAQAMAAQDAVSTTAVKGEQTAEEKSALGGLGDMLFGTTGAGGRKRQSVAET
MAKSAARSIGSQVGRELMRGILGSLLGSSKRR
NT seq
1539 nt
NT seq
+upstream
nt +downstream
nt
atgattgcacctttcccgatagcccgagacaaccgcgccgaaagcgccacagacctggtc
atgctgccgcaattggccaatcgccatggtcttattaccggggcaaccggcaccggaaaa
actgtcactttgcaggtgttggccgaggctttttccagaatgggtacgcctgtattcatg
gccgatgtcaaaggcgacctgaccggtatttctcaaccaggtcaatcctccccgaagttc
gaggaacgcctgaaaacgacgggtatcccagtgcctgaatttgcaggtagcccagtgact
ttgtgggatgtattcggcaaacagggacaccctgtacgggccaccatttcagacctgggt
cctttgttgttgggccgtttgctgggtttgaatgacacgcaggaaggcctgctgaacctg
gtattcaaaattgccgatgacaacggcatgctgttgctcgacctgaaagacctgcgtgcc
atgttgcagcatgtgggcgaaaatgcgaaagaattcacgaccgaatacggcaatatttct
gctgcatcggtgggtgccattcagcgcggcctgctggcccttgaagggcagggggcagac
cagttttttggcgagcccatgctgaacattgacgacatgatgcagaccgattcaaacggc
cggggtgtggtcaacattctggcggccagccagcttatgaattcccccaaactgtacgcc
acgtttttgttgtggttgttgtcggagttgttcgaaaacctgcccgaggtgggcgatgtg
gacaaacccaaaatggtgtttttctttgatgaagcccaccttttgttcacagatgccccc
aagccattgatcgagaaagtggagttggtggtccgcttgatccgctccaaaggggtgggt
gtttattttgtgacccagaacccgctggacgtgccggattccgtgctgggccagttgggc
aaccgcgttcagcacgccttgcgcgctttcacaccaagggatcaaaaggcggtgaaagtg
gcggctgaaaccatgcgcccgaacccgggtctggacattgaggccagcatcaccgagctg
gccgtgggtgaagcactggttagtttcctggaccccaaaggcacaccaagcccaacctgc
cgtgcctgggtatacccacctgccagcaagtttggcccagccacgccagagcaatgcaag
acattgattgccaactcgctggtggccggggtgtatgaacaaaccgtggaccgtgaatcg
gctttcgagatgttgaaagcgcacacagcgcaggccatggctgcccaagatgccgtaagc
acaacggctgtaaagggcgagcaaaccgctgaagagaaaagcgccttgggtggtctgggt
gacatgttgttcggcacgacgggcgcgggagggcgcaaacgccaaagtgttgccgaaacc
atggcaaaaagcgcagcccgcagcatcggttcccaggttggccgcgaattgatgcgcggt
attcttggttccttgttgggcagcagcaaacgccgctaa
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