Limnobacter thiooxidans: RGQ30_11210
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Entry
RGQ30_11210 CDS
T09704
Symbol
lysS
Name
(GenBank) lysine--tRNA ligase
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
lto
Limnobacter thiooxidans
Pathway
lto00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
lto00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
RGQ30_11210 (lysS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
lto01007
]
RGQ30_11210 (lysS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lto03016
]
RGQ30_11210 (lysS)
Enzymes [BR:
lto01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
RGQ30_11210 (lysS)
Amino acid related enzymes [BR:
lto01007
]
Aminoacyl-tRNA synthetase
Class II (A)
RGQ30_11210 (lysS)
Transfer RNA biogenesis [BR:
lto03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
RGQ30_11210 (lysS)
Prokaryotic type
Other AARSs
RGQ30_11210 (lysS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
tRNA-synt_2d
Methyltransf_23
Motif
Other DBs
NCBI-ProteinID:
BET25620
UniProt:
A0AA86J6Y9
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All DBs
Position
1239979..1241511
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AA seq
510 aa
AA seq
DB search
MNDKTQEAGTELPVDENQIIAERRSKLAKLREKGQPFPNSFKPEHRAADLHAHYGLLDKE
TLDPQGIEVSVSGRMMLKRVMGKASFATVQDGTGRIQFYINNEGVGEDVHGEFKHWDLGD
IIAAKGKLFKTNKGELSVHCTEIHLLAKSLRPLPDKFHGLADQEIKYRQRYVDLIVTEET
RNTFVARSRAMSSIRNFMSDNGFLEVETPMLHPIPGGASAKPFITHHNALDMEMYLRIAP
ELYLKRLIVGGFERVFEINRNFRNEGVSPRHNPEFTMMEFYAAYWNYRDLMDFTEQVIQH
AAVTATGSANLTYQGRELDLSKPFARLTIVEAIQKYFPEYATDDLNNIDYLKKALAKKGV
HVDKEPALKNAGKGALQLALFEETSESLLWEPTFIVDYPVEVSPLARASDADSQITERFE
LFITGREIANGFSELNDPEDQADRFKKQVEAKEAGDDEAMFFDADFIRALEYGMPPTGGC
GIGIDRLMMLITDSPNIRDVILFPHLRRED
NT seq
1533 nt
NT seq
+upstream
nt +downstream
nt
atgaacgacaaaacacaagaagctggcaccgaactgcccgtagacgagaaccagattatt
gccgaacgccgcagcaagctggccaaattgcgcgagaagggtcagcctttccccaacagc
ttcaagcccgagcaccgcgctgctgacctgcatgcgcactatggtttgttggacaaggaa
acactggacccgcaaggcattgaggtgtcggtctccggccgcatgatgcttaaacgcgtg
atgggcaaggccagttttgcaactgtgcaggacggcacaggccgcatccagttctacatc
aacaacgaaggtgtgggcgaagacgttcacggcgaattcaagcactgggatttgggcgac
atcattgccgccaagggcaaactgttcaaaaccaacaagggcgaattgagcgtgcattgc
acggaaattcatttgttggcgaaaagcctgcgcccattgccagacaagtttcacggcctg
gccgatcaggaaatcaagtaccgccagcgctacgtggatttgatcgtgaccgaggaaacc
cgcaacacctttgttgcgcgttccagggccatgtcctcaattcgcaatttcatgagcgac
aacggttttctggaagtggaaaccccgatgctgcaccccattcccggtggcgcatcggcc
aagcctttcattacccatcacaatgcgctggacatggaaatgtacctgcgaattgcgcct
gaactgtatttgaagcgcctgattgtgggcggctttgagcgcgtgttcgagatcaaccgc
aacttccgcaatgaaggggtcagcccgcgccacaaccctgaattcaccatgatggaattc
tatgcggcatactggaactaccgcgacctgatggacttcaccgagcaggtgattcagcat
gcagccgtgaccgccactggtagcgccaacctgacttaccagggccgcgagctggatttg
tccaagccttttgcacgcctgaccattgttgaagccattcagaagtatttccctgaatac
gccacggacgatttgaacaacatcgactacctgaaaaaggccttggccaagaagggtgtg
catgtggacaaagagcctgccctgaaaaatgcaggcaagggcgcattgcaattggccctg
ttcgaggaaacctctgaaagcctgttgtgggaacctactttcattgtggactatcctgtt
gaagtgtctcccttggctcgtgcgtcggacgctgattcacaaatcaccgaacgtttcgag
ttgtttattaccggccgcgaaattgccaacggcttttctgaattgaacgatccggaagac
caagccgaccgattcaagaagcaggttgaagcaaaagaagcgggcgatgacgaagccatg
ttcttcgacgccgacttcattcgtgcgttggaatatggcatgccacccaccggtggttgt
ggtatcggcattgaccgtttgatgatgctgatcactgacagccctaatattcgggacgtc
attctgtttccgcacttgaggcgcgaagactaa
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