Limnobacter thiooxidans: RGQ30_12680
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Entry
RGQ30_12680 CDS
T09704
Symbol
trpS
Name
(GenBank) tryptophan--tRNA ligase
KO
K01867
tryptophanyl-tRNA synthetase [EC:
6.1.1.2
]
Organism
lto
Limnobacter thiooxidans
Pathway
lto00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
lto00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
RGQ30_12680 (trpS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
lto01007
]
RGQ30_12680 (trpS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lto03016
]
RGQ30_12680 (trpS)
Enzymes [BR:
lto01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.2 tryptophan---tRNA ligase
RGQ30_12680 (trpS)
Amino acid related enzymes [BR:
lto01007
]
Aminoacyl-tRNA synthetase
Class I (G)
RGQ30_12680 (trpS)
Transfer RNA biogenesis [BR:
lto03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
RGQ30_12680 (trpS)
Prokaryotic type
RGQ30_12680 (trpS)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_1b
Motif
Other DBs
NCBI-ProteinID:
BET25767
UniProt:
A0AA86MI28
LinkDB
All DBs
Position
1410373..1411410
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AA seq
345 aa
AA seq
DB search
MFPERVLSGMRPTGLLHLGHYHGVLKNWVKLQNEFPCLFFVADWHALTTHYETPEVIKES
VWDMVIDWLAAGVDPEKATLFIQSKVPEHAELHLLLSMNTPLSWLERVPTYKDQQEKLGD
KDLGTYGFLGYPLLQSADILIYRAAQVPVGEDQVPHIELTREIARRFNHFYSREKLLDAK
GVEIGRKPILLEPKALLTEASKMPGLDGMKMSKSYQNTLALRETPENISQKVRKMPTDPA
RVRRTDPGDPAKCPVWQLHEVYSDDTTKQWVQEGCKSAGIGCIQCKEPIIDAITRELAPM
RERAAMYADNPALVRSIIDQGCERARALASDTMKDVRKHMGLDYS
NT seq
1038 nt
NT seq
+upstream
nt +downstream
nt
atgtttcctgaacgcgtattgtcgggcatgcgccccaccggtttgttgcaccttggtcat
taccatggtgtgttgaagaactgggtgaaactccagaacgagtttccctgcctgttcttt
gtggccgattggcatgcgctgaccacgcattatgaaacaccggaagtgatcaaggaaagc
gtgtgggacatggtcatcgactggctggccgcgggtgttgatcctgagaaggcgactctg
tttattcagtccaaggtgcctgaacacgctgagctgcatttgctgctgtccatgaataca
ccgttgagctggcttgaacgtgtacccacgtacaaggatcagcaggaaaaactgggcgac
aaggacttgggcacctacggttttctgggttacccacttttgcagtcagcggacatattg
atttaccgggccgcgcaagtgcctgtgggcgaagaccaggttccccatattgagttgacg
cgtgaaatcgcgcgccgcttcaatcatttctacagccgggaaaagctgctcgacgccaag
ggcgttgaaattggccgcaagccaattctgcttgagcccaaggccctgttgacagaagcc
agcaagatgcctggccttgacggcatgaaaatgtcgaagagttatcagaacaccctggcc
ttgcgagagactccggaaaatatttcccagaaagtgcgcaagatgccaaccgaccctgcg
cgcgtacgccgcaccgaccctggcgaccctgccaaatgcccggtgtggcaactgcatgaa
gtgtattccgatgacaccacgaagcagtgggtgcaggaaggttgcaagtccgccggaatt
ggctgtattcaatgcaaagaacccattattgatgccattacccgcgagcttgcccccatg
cgtgaacgcgcagccatgtatgctgacaacccggccctggtgcgcagcatcattgatcaa
gggtgtgaacgtgcccgcgcattggccagcgataccatgaaggacgtgcgcaagcacatg
ggcctggattattcctga
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