Limnobacter thiooxidans: RGQ30_12870
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Entry
RGQ30_12870 CDS
T09704
Name
(GenBank) DNA-3-methyladenine glycosylase
KO
K01247
DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
lto
Limnobacter thiooxidans
Pathway
lto03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
lto00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
RGQ30_12870
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lto03400
]
RGQ30_12870
Enzymes [BR:
lto01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
RGQ30_12870
DNA repair and recombination proteins [BR:
lto03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
RGQ30_12870
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
Motif
Other DBs
NCBI-ProteinID:
BET25786
UniProt:
A0AA86J1E0
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All DBs
Position
1429049..1429702
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AA seq
217 aa
AA seq
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MAPGLNLNLDPQAPAYWQEACTALALQSPVWAELVNRHTDRALRSRGAPYETMLRSLVGQ
QISVKAAEAVWLRVVQALNGELSSQVLLALNDDILKATGLSRQKIAYSRALSEFEQKGLL
ELNLLDSMDDEACTRHLCEIKGVGRWTAQMFLMFCLRRPDVWPVDDIGVQRGISRQFFEG
EPIGPKEALQFGEKLKPWRTVAAWYLWRSLDPVVVDY
NT seq
654 nt
NT seq
+upstream
nt +downstream
nt
atggcgccgggcctgaacctgaatctggaccctcaggcacctgcctattggcaggaggct
tgcactgcgttggctttgcaaagccctgtgtgggctgaactggtcaatcgccacaccgac
cgcgcccttcgatcccgaggggcaccttatgaaaccatgctgcgctcgctggtgggtcag
caaatttcagtcaaggctgctgaagctgtttggttaagggttgtgcaagccctgaatggc
gaattgagcagtcaggtcttgctcgctctaaatgatgacatcttgaaggcgacaggtctt
tcccgccagaaaattgcgtactcacgggccttgagcgaatttgagcaaaaaggccttctc
gaattgaatttgcttgacagcatggatgacgaagcctgcacccgacatctttgtgaaatc
aagggcgtaggccgctggacagcccagatgttcttgatgttctgtttgcgccggcccgat
gtttggcccgtggatgacattggcgtgcagcgcggtatctcccgccaatttttcgaaggc
gaacccatcggaccgaaagaagcactacaattcggggaaaaattaaaaccttggcgtact
gtggcagcgtggtatttgtggcgcagccttgaccctgtcgtggttgactattaa
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