Limnobacter thiooxidans: RGQ30_13130
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Entry
RGQ30_13130 CDS
T09704
Name
(GenBank) long-chain fatty acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
lto
Limnobacter thiooxidans
Pathway
lto00061
Fatty acid biosynthesis
lto00071
Fatty acid degradation
lto01100
Metabolic pathways
lto01212
Fatty acid metabolism
lto02024
Quorum sensing
lto04146
Peroxisome
Module
lto_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
lto00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
RGQ30_13130
00071 Fatty acid degradation
RGQ30_13130
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
RGQ30_13130
09145 Cellular community - prokaryotes
02024 Quorum sensing
RGQ30_13130
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
lto01004
]
RGQ30_13130
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lto04147
]
RGQ30_13130
Enzymes [BR:
lto01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
RGQ30_13130
Lipid biosynthesis proteins [BR:
lto01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
RGQ30_13130
Exosome [BR:
lto04147
]
Exosomal proteins
Exosomal proteins of breast milk
RGQ30_13130
Exosomal proteins of breast cancer cells
RGQ30_13130
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Ortholog
Paralog
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-ProteinID:
BET25812
UniProt:
A0AA86MI43
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All DBs
Position
1455456..1457147
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AA seq
563 aa
AA seq
DB search
MTDKAWIQSYPPGVPTAVDLNQYPSIRDIFEDASRKFADNTAFSNMGTGMTYARLDALTR
DFGAYLQSLPGMKKGDRVAFMMPNLLQYPVAILGAIRAGFVVVNVNPLYTPTELEYQLRD
SGAKVVVVFENVAHTLDKVLKNTPVEHIVLASMGEMHGFFKRVLLNFVVRYVKKLVPAFK
IAGAITFKKALALGSNNELKKVNITQDDLAFLQYTGGTTGVAKGAMLTHGNIVANLQQAS
AWLNQDIEEGKEIAITALPMYHIFCLTANILVFLKVGGHSLLITDPRNMKAFVKTLTAVP
FTALTGVNTLFNGLLNTPGFEQVDFSHVKLVLGGGAAIEPAVADRWKKVTGTRLSEAYGL
TEASPAVCINPLHEEYNGSIGLPVPSTDVTIRDDDFNQLPVGQEGELCVKGPQVMRGYWN
KPRETAEILTQDGWLKTGDIAYMDENGYFYITDRKKDMILVSGFNVYPKEIEAVATMLEG
VFEAAAVGVPDGKTGEAVKLFVVKKDNNLTAEQVIEHCRKHMTAYKIPRHVEFMKDLPKS
PVGKVLRRELRDMEKKRLQDQNA
NT seq
1692 nt
NT seq
+upstream
nt +downstream
nt
gtgacagataaagcctggattcaaagctacccacccggagtacccacggcggttgatttg
aatcagtacccctccattcgggatattttcgaggatgccagtcgcaaattcgcggataac
accgcattcagcaacatgggcacgggcatgacctatgcccggcttgatgcgctcacacgc
gatttcggtgcctacctgcaaagtttgcctggcatgaaaaagggcgatcgtgttgctttc
atgatgccgaatctgttgcagtaccctgtcgccatattgggcgcgatccgggcgggcttc
gtggtagtgaacgtcaacccgctgtacacccccaccgagcttgaatatcagcttcgtgat
tccggcgccaaggtggtcgtggtcttcgagaatgtggcccacacactggataaagtactg
aaaaacacgccagttgagcacattgtgctggcctccatgggcgaaatgcacggttttttc
aagcgcgtgttgctcaatttcgtggttcgatatgtcaagaaattggtgcctgcgttcaaa
attgccggcgccattactttcaagaaagcgttggcgctgggttccaacaatgaactgaaa
aaggtcaatatcacccaggacgatttggcctttttgcaatacacaggtggcaccacaggt
gtggccaaaggcgccatgctgacccatggcaatattgtggccaatctacaacaggcctcg
gcctggcttaaccaggacattgaagaaggcaaggaaatcgccatcacggcgctgccgatg
taccacatcttctgtttgacagccaatattctggtgttcctgaaagtgggcgggcatagc
ttgctgatcacagacccccgcaacatgaaagcgtttgtcaaaaccttgactgctgtgcct
ttcacggccctcacaggggttaacaccctgtttaacggtttgttgaatacgcccggattt
gagcaggttgatttttcacatgtgaagcttgtacttggcggcggtgctgccattgaaccc
gctgtggctgaccgctggaaaaaggtcaccggcacacggttgtcggaagcatacggcctg
acagaagcctcccctgcagtgtgtattaatccgctccacgaagaatacaacggctctatt
ggcttgcctgtaccgtccacagacgtcaccattcgcgacgacgacttcaatcagttacca
gttggtcaggaaggggagttgtgtgtcaaaggcccgcaagtgatgcgcggatactggaac
aagccgcgtgaaacagccgaaattctgacccaggacggctggttgaagactggcgatatc
gcttacatggatgaaaacggctatttctacatcaccgatcgcaagaaagacatgattctg
gtgtcgggctttaatgtctatcccaaggagattgaggccgtcgccacgatgctggaaggc
gttttcgaggcggcagcggttggcgttccagatggcaaaactggcgaagccgtgaagttg
ttcgtcgtcaagaaagacaacaacctgacagccgagcaggtgatcgagcattgccgcaag
cacatgacagcctacaaaattccacgccacgtggaattcatgaaagacctgcccaagagc
cccgtgggcaaggtgttgcgccgcgagctgcgtgacatggaaaagaagcgtttgcaggat
caaaacgcctga
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